RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 H2BFWTQ7Z2G1 175 aa15.09■□□□□ 0.01
CHKA-206ENST00000531341 TBC1D26Q86UD7 250 aa15.09■□□□□ 0.01
CHKA-206ENST00000531341 P2RY1P47900 373 aa15.08■□□□□ 0
CHKA-206ENST00000531341 ERHP84090 104 aaKnown RBP15.08■□□□□ 0
CHKA-206ENST00000531341 LYSMD2Q8IV50 215 aa15.08■□□□□ 0
CHKA-206ENST00000531341 OR5H2Q8NGV7 314 aa15.08■□□□□ 0
CHKA-206ENST00000531341 MRGPRFQ96AM1 343 aa15.08■□□□□ 0
CHKA-206ENST00000531341 RAB40CQ96S21 281 aa15.08■□□□□ 0
CHKA-206ENST00000531341 NAT1P18440 290 aa15.07■□□□□ 0
CHKA-206ENST00000531341 CRYBB3P26998 211 aa15.07■□□□□ 0
CHKA-206ENST00000531341 GABARAPL2P60520 117 aa15.07■□□□□ 0
CHKA-206ENST00000531341 OR6F1Q8NGZ6 308 aa15.07■□□□□ 0
CHKA-206ENST00000531341 TMEM231Q9H6L2 316 aa15.07■□□□□ 0
CHKA-206ENST00000531341 DNAH5Q8TE73 4624 aa15.06■□□□□ 0
CHKA-206ENST00000531341 HERC1Q15751 4861 aa15.06■□□□□ 0
CHKA-206ENST00000531341 LOC100506127A0A0U1RQW1 187 aa15.06■□□□□ 0
CHKA-206ENST00000531341 Q6ZR54 194 aa15.06■□□□□ 0
CHKA-206ENST00000531341 FNDC4Q9H6D8 234 aaPredicted RBP15.06■□□□□ 0
CHKA-206ENST00000531341 A0A1W2PS18 150 aa15.05■□□□□ -0
CHKA-206ENST00000531341 HLA-DMAP28067 261 aa15.05■□□□□ -0
CHKA-206ENST00000531341 HRH1P35367 487 aa15.05■□□□□ -0
CHKA-206ENST00000531341 HSPA13P48723 471 aa15.05■□□□□ -0
CHKA-206ENST00000531341 METTL26Q96S19 204 aa15.05■□□□□ -0
CHKA-206ENST00000531341 FAM212BQ9NTI7 297 aaPredicted RBP15.05■□□□□ -0
CHKA-206ENST00000531341 XCL2Q9UBD3 114 aa15.05■□□□□ -0
CHKA-206ENST00000531341 CD74P04233 296 aa15.04■□□□□ -0
CHKA-206ENST00000531341 TGFBR1P36897 503 aa15.04■□□□□ -0
CHKA-206ENST00000531341 TAS2R20P59543 309 aa15.04■□□□□ -0
CHKA-206ENST00000531341 DHRS2Q13268 280 aa15.04■□□□□ -0
CHKA-206ENST00000531341 PSMG4Q5JS54 123 aa15.04■□□□□ -0
CHKA-206ENST00000531341 A0A0B4J293 547 aa15.03■□□□□ -0
CHKA-206ENST00000531341 CLN5O75503 358 aa15.03■□□□□ -0
CHKA-206ENST00000531341 IFNA10P01566 189 aa15.03■□□□□ -0
CHKA-206ENST00000531341 IGKV1-5P01602 117 aa15.03■□□□□ -0
CHKA-206ENST00000531341 RNASE2P10153 161 aaKnown RBP15.03■□□□□ -0
CHKA-206ENST00000531341 SNCAP37840 140 aa15.03■□□□□ -0
CHKA-206ENST00000531341 TAS2R46P59540 309 aa15.03■□□□□ -0
CHKA-206ENST00000531341 Q6ZRM9 215 aa15.03■□□□□ -0
CHKA-206ENST00000531341 TMEM230Q96A57 120 aa15.03■□□□□ -0
CHKA-206ENST00000531341 S100A16Q96FQ6 103 aaKnown RBP15.03■□□□□ -0
CHKA-206ENST00000531341 IGKV1-17P01599 117 aa15.02■□□□□ -0
CHKA-206ENST00000531341 TIGITQ495A1 244 aa15.02■□□□□ -0
CHKA-206ENST00000531341 FCGR1BQ92637 280 aa15.02■□□□□ -0
CHKA-206ENST00000531341 U3KQE9 123 aa15.02■□□□□ -0
CHKA-206ENST00000531341 HELTA6NFD8 242 aa15.01□□□□□ -0.01
CHKA-206ENST00000531341 NPY1RP25929 384 aa15.01□□□□□ -0.01
CHKA-206ENST00000531341 ETV6P41212 452 aa15.01□□□□□ -0.01
CHKA-206ENST00000531341 TMEM69Q5SWH9 247 aa15.01□□□□□ -0.01
CHKA-206ENST00000531341 OR4X1Q8NH49 305 aa15.01□□□□□ -0.01
CHKA-206ENST00000531341 PLA2G2EQ9NZK7 142 aa15.01□□□□□ -0.01
CHKA-206ENST00000531341 INS-IGF2F8WCM5 200 aa15□□□□□ -0.01
CHKA-206ENST00000531341 IFNA21P01568 189 aa15□□□□□ -0.01
CHKA-206ENST00000531341 IFNA17P01571 189 aa15□□□□□ -0.01
CHKA-206ENST00000531341 P0C879 139 aa15□□□□□ -0.01
CHKA-206ENST00000531341 EMP1P54849 157 aa15□□□□□ -0.01
CHKA-206ENST00000531341 TSPAN5P62079 268 aa15□□□□□ -0.01
CHKA-206ENST00000531341 LPCAT3Q6P1A2 487 aa15□□□□□ -0.01
CHKA-206ENST00000531341 C16orf54Q6UWD8 224 aa15□□□□□ -0.01
CHKA-206ENST00000531341 UBE2DNLQ8IWF7 75 aa15□□□□□ -0.01
CHKA-206ENST00000531341 GLMPQ8WWB7 406 aa15□□□□□ -0.01
CHKA-206ENST00000531341 RAB26Q9ULW5 256 aa15□□□□□ -0.01
CHKA-206ENST00000531341 H3BMM0 161 aa14.99□□□□□ -0.01
CHKA-206ENST00000531341 PRSS3P35030 304 aa14.99□□□□□ -0.01
CHKA-206ENST00000531341 OPRK1P41145 380 aa14.99□□□□□ -0.01
CHKA-206ENST00000531341 UBE2NLQ5JXB2 153 aa14.99□□□□□ -0.01
CHKA-206ENST00000531341 SLC35G3Q8N808 338 aa14.99□□□□□ -0.01
CHKA-206ENST00000531341 DEFB1P60022 68 aa14.98□□□□□ -0.01
CHKA-206ENST00000531341 ZNF705AQ6ZN79 300 aaPredicted RBP14.98□□□□□ -0.01
CHKA-206ENST00000531341 VCX3BQ9H321 246 aa14.98□□□□□ -0.01
CHKA-206ENST00000531341 FAM90A26D6RGX4 464 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 SPART-AS1P0CW21 52 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 PI3P19957 117 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 S100GP29377 79 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 UCP3P55916 312 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 FXYD7P58549 80 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 KCTD21Q4G0X4 260 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 SAMD12Q8N8I0 201 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 GPX8Q8TED1 209 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 NARS2Q96I59 477 aaKnown RBP14.97□□□□□ -0.01
CHKA-206ENST00000531341 TP53RKQ96S44 253 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 C1QTNF4Q9BXJ3 329 aa14.97□□□□□ -0.01
CHKA-206ENST00000531341 A0A0G2JRQ6 117 aa14.96□□□□□ -0.01
CHKA-206ENST00000531341 ZNF705FA8MVS1 300 aaPredicted RBP14.96□□□□□ -0.01
CHKA-206ENST00000531341 CORTO00230 105 aa14.96□□□□□ -0.01
CHKA-206ENST00000531341 ZNF705DP0CH99 300 aaPredicted RBP14.96□□□□□ -0.01
CHKA-206ENST00000531341 ZNF705BP0CI00 300 aaPredicted RBP14.96□□□□□ -0.01
CHKA-206ENST00000531341 RPL5P46777 297 aaKnown RBP14.96□□□□□ -0.01
CHKA-206ENST00000531341 SUB1P53999 127 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHKA-206ENST00000531341 USF2Q15853 346 aaPredicted RBP14.96□□□□□ -0.01
CHKA-206ENST00000531341 BSXQ3C1V8 233 aa14.96□□□□□ -0.01
CHKA-206ENST00000531341 GDF5OSQ5U4N7 250 aa14.96□□□□□ -0.01
CHKA-206ENST00000531341 NEU1Q99519 415 aa14.96□□□□□ -0.01
CHKA-206ENST00000531341 IGKV3-20P01619 116 aa14.95□□□□□ -0.02
CHKA-206ENST00000531341 HNRNPCP07910 306 aaKnown RBP eCLIP14.95□□□□□ -0.027e-9■■□□□ 13.8
CHKA-206ENST00000531341 RPS19P39019 145 aaKnown RBP14.95□□□□□ -0.02
CHKA-206ENST00000531341 HOXA1P49639 335 aaPredicted RBP14.95□□□□□ -0.02
CHKA-206ENST00000531341 NUTF2P61970 127 aaKnown RBP14.95□□□□□ -0.02
CHKA-206ENST00000531341 C1orf134Q5TEV5 83 aa14.95□□□□□ -0.02
CHKA-206ENST00000531341 IGHV3OR16-12A0A075B7B8 117 aa14.94□□□□□ -0.02
CHKA-206ENST00000531341 TMEM127O75204 238 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms