RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 MRPL27Q9P0M9 148 aaKnown RBP12.21□□□□□ -0.45
RELA-216ENST00000531238 UFC1Q9Y3C8 167 aa12.21□□□□□ -0.45
RELA-216ENST00000531238 HOXB5P09067 269 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 CD7P09564 240 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 LINC00299Q6ZSB3 139 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 TMEM61Q8N0U2 210 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 DUSP18Q8NEJ0 188 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 C20orf24Q9BUV8 137 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 PALMDQ9NP74 551 aa12.2□□□□□ -0.46
RELA-216ENST00000531238 DUXBA0A1W2PPF3 345 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 CENPXA8MT69 81 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 MPTX1A8MV57 137 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 K7EMT4 169 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 NUPL2O15504 423 aaKnown RBP12.19□□□□□ -0.46
RELA-216ENST00000531238 GNG7O60262 68 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 OR4E1P0C645 316 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 UBE2MP61081 183 aaKnown RBP12.19□□□□□ -0.46
RELA-216ENST00000531238 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 TOMM20LQ6UXN7 152 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 MARC2Q969Z3 335 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 OR10C1Q96KK4 312 aa12.19□□□□□ -0.46
RELA-216ENST00000531238 GAR1Q9NY12 217 aaKnown RBP12.19□□□□□ -0.46
RELA-216ENST00000531238 A8MZ25 164 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 LYRM1O43325 122 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 ADAP1O75689 374 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 SCAF4O95104 1147 aaKnown RBP12.18□□□□□ -0.46
RELA-216ENST00000531238 OPRK1P41145 380 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 NPBWR1P48145 328 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 DHRS2Q13268 280 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 GUCA2BQ16661 112 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 SLC24A4Q8NFF2 622 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 OR4X1Q8NH49 305 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 OR1S1Q8NH92 325 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 DTD1Q8TEA8 209 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 HIPK2Q9H2X6 1198 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 DAZ1Q9NQZ3 744 aaKnown RBP12.18□□□□□ -0.46
RELA-216ENST00000531238 TMED3Q9Y3Q3 217 aa12.18□□□□□ -0.46
RELA-216ENST00000531238 IGHV3-49A0A0A0MS15 119 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 C15orf62A8K5M9 175 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 CORTO00230 105 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 CLN5O75503 358 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 YIF1AO95070 293 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 APOHP02749 345 aaPredicted RBP12.17□□□□□ -0.46
RELA-216ENST00000531238 NHLRC4P0CG21 123 aaPredicted RBP12.17□□□□□ -0.46
RELA-216ENST00000531238 SLC25A6P12236 298 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 RELQ04864 619 aaPredicted RBP12.17□□□□□ -0.46
RELA-216ENST00000531238 PRSS54Q6PEW0 395 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 LYG2Q86SG7 212 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 LILRB2Q8N423 598 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 NEURL2Q9BR09 285 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 CCDC32Q9BV29 185 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 WFDC10AQ9H1F0 79 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 ZFAND3Q9H8U3 227 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 SMPXQ9UHP9 88 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 TBC1D24Q9ULP9 559 aa12.17□□□□□ -0.46
RELA-216ENST00000531238 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 TCRBP04435 133 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 NPY1RP25929 384 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 CD81P60033 236 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 IFITM3Q01628 133 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 DEFB125Q8N687 156 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 RNASEH2CQ8TDP1 164 aaKnown RBP12.16□□□□□ -0.46
RELA-216ENST00000531238 CACFD1Q9UGQ2 172 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 U3KQ87 197 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
RELA-216ENST00000531238 IGHV3OR16-13A0A075B7E8 117 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 IGHV3-74A0A0B4J1X5 117 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 IGHV7-4-1A0A0J9YVY3 117 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 CHEK1O14757 476 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 IFNA10P01566 189 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 IAPPP10997 89 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 TIGITQ495A1 244 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 LINC00322Q6ZN03 302 aaPredicted RBP12.15□□□□□ -0.46
RELA-216ENST00000531238 ZNF600Q6ZNG1 722 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 GTSCR1Q86UQ5 136 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 S100ZQ8WXG8 99 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 MAGT1Q9H0U3 335 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 C20orf85Q9H1P6 137 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 PTTG2Q9NZH5 202 aa12.15□□□□□ -0.46
RELA-216ENST00000531238 PUS1Q9Y606 427 aaKnown RBP eCLIP12.15□□□□□ -0.46
RELA-216ENST00000531238 TRAV6A0A075B6T7 132 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 TRAV14DV4A0A0A6YYC5 116 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 TRAV25A0A0B4J276 109 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 IGLC1P0CG04 106 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 C4orf46Q504U0 113 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 TMEM116Q8NCL8 245 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 RNF2Q99496 336 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 RHPN1-AS1Q9BWJ2 59 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 TENM3Q9P273 2699 aa12.14□□□□□ -0.47
RELA-216ENST00000531238 PIGBOS1A0A0B4J2F0 54 aa12.13□□□□□ -0.47
RELA-216ENST00000531238 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
RELA-216ENST00000531238 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
RELA-216ENST00000531238 FAM90A26D6RGX4 464 aa12.13□□□□□ -0.47
RELA-216ENST00000531238 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
RELA-216ENST00000531238 RND2P52198 227 aa12.13□□□□□ -0.47
RELA-216ENST00000531238 ID3Q02535 119 aa12.13□□□□□ -0.47
RELA-216ENST00000531238 FAM90A2PQ658T7 463 aa12.13□□□□□ -0.47
RELA-216ENST00000531238 RBPMS2Q6ZRY4 209 aaKnown RBP12.13□□□□□ -0.47
RELA-216ENST00000531238 COQ8AQ8NI60 647 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms