RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 RPS10P46783 165 aaKnown RBP4.47□□□□□ -1.69
PCF11-205ENST00000530906 FAM3BP58499 235 aaPredicted RBP4.47□□□□□ -1.69
PCF11-205ENST00000530906 RPL23P62829 140 aaKnown RBP4.47□□□□□ -1.69
PCF11-205ENST00000530906 GAMTQ14353 236 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 ADIRFQ15847 76 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 MINOS1Q5TGZ0 78 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 CST9LP1Q5W188 147 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 UNQ6494/PRO21346Q6UXR6 183 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 IQCF2Q8IXL9 164 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 LINC00518Q8N0U6 118 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 Q8N1Y9 231 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 TMEM116Q8NCL8 245 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 ABHD5Q8WTS1 349 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 Q8WTZ3 238 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 ISOC2Q96AB3 205 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 C1orf159Q96HA4 380 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 FAM210BQ96KR6 192 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 TRGV9Q99603 122 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 SAV1Q9H4B6 383 aaPredicted RBP4.47□□□□□ -1.69
PCF11-205ENST00000530906 DPM3Q9P2X0 92 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 MINOS1-NBL1R4GNA1 71 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 PCNX1Q96RV3 2341 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 SPTA1P02549 2419 aa4.47□□□□□ -1.69
PCF11-205ENST00000530906 CEP295Q9C0D2 2601 aa4.46□□□□□ -1.69
PCF11-205ENST00000530906 TCRBV4S1A1TA0A5B7 111 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 IGLC7A0M8Q6 106 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 A6NNC1 897 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 PPP5D1E7EU14 171 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 ENSAO43768 121 aaKnown RBP4.46□□□□□ -1.7
PCF11-205ENST00000530906 SLC25A17O43808 307 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 GGCTO75223 188 aaKnown RBP4.46□□□□□ -1.7
PCF11-205ENST00000530906 S100A9P06702 114 aaKnown RBP4.46□□□□□ -1.7
PCF11-205ENST00000530906 PFN1P07737 140 aaKnown RBP4.46□□□□□ -1.7
PCF11-205ENST00000530906 C8orf88P0DMB2 117 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 IGFBP2P18065 325 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 COL8A2P25067 703 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 OR10J1P30954 320 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 S100A12P80511 92 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 WT1-ASQ06250 92 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 FOXL1Q12952 345 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 PSG5Q15238 335 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 ZNF674Q2M3X9 581 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 TPTE2P1Q5T6R2 138 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 FAM78BQ5VT40 261 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 LINC01551Q86U37 167 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 PPP1R27Q86WC6 154 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 OR51G1Q8NGK1 321 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 SSMEM1Q8WWF3 244 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 SMIM12Q96EX1 92 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 SLC25A33Q9BSK2 321 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 SRD5A3Q9H8P0 318 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 DNAJC4Q9NNZ3 241 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 RNF24Q9Y225 148 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 SIGLEC9Q9Y336 463 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 X6R8D5 127 aa4.46□□□□□ -1.7
PCF11-205ENST00000530906 SPTBN2O15020 2390 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 LOC105371242A0A075B767 164 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 MDFIC2A0A1B0GVS7 189 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 A0A1W2PPI3 338 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 PSMB11A5LHX3 300 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 CGB1A6NKQ9 187 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 ODF3BA8MYP8 253 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 COX7A2P2O60397 106 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 SCGB2A1O75556 95 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 NDUFA3O95167 84 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 NDUFB4O95168 129 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 MOSP00540 346 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 OR10J4P0C629 311 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 S100A7P31151 101 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 GALR1P47211 349 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 REG1BP48304 166 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 EFNA4P52798 201 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 PLP1P60201 277 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 KIAA0141Q14154 515 aaPredicted RBP4.45□□□□□ -1.7
PCF11-205ENST00000530906 COX19Q49B96 90 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 GCSAMLQ5JQS6 135 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 DNLZQ5SXM8 178 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 C10orf113Q5VZT2 155 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 MOB3BQ86TA1 216 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 NPBQ8NG41 125 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 OR2T10Q8NGZ9 312 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 PERPQ96FX8 193 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 ZNF747Q9BV97 191 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 SEPSECSQ9HD40 501 aaKnown RBP4.45□□□□□ -1.7
PCF11-205ENST00000530906 ONECUT1Q9UBC0 465 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 TBL2Q9Y4P3 447 aaKnown RBP4.45□□□□□ -1.7
PCF11-205ENST00000530906 F11RQ9Y624 299 aaKnown RBP4.45□□□□□ -1.7
PCF11-205ENST00000530906 TNCP24821 2201 aa4.45□□□□□ -1.7
PCF11-205ENST00000530906 PKDREJQ9NTG1 2253 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 FRYQ5TBA9 3013 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 TRAV30A0A087WSZ9 112 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 OVOL3O00110 214 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 NBR2O15453 112 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 OR7C2O60412 319 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 SOD3P08294 240 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 CXCL1P09341 107 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 CDX1P47902 265 aaPredicted RBP4.44□□□□□ -1.7
PCF11-205ENST00000530906 ATP5G3P48201 142 aa4.44□□□□□ -1.7
PCF11-205ENST00000530906 MEOX2P50222 304 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms