RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 DEFA5Q01523 94 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 PJVKQ0ZLH3 352 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 RPEL1Q2QD12 228 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 IL34Q6ZMJ4 242 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-213ENST00000530784 BPIFB6Q8NFQ5 453 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 USMG5Q96IX5 58 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 PHB2Q99623 299 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 CMSS1Q9BQ75 279 aaKnown RBP4.8□□□□□ -1.64
CSDE1-213ENST00000530784 MND1Q9BWT6 205 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 PLGRKTQ9HBL7 147 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 RETNQ9HD89 108 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 RDH8Q9NYR8 311 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 SIGLEC8Q9NYZ4 499 aa4.8□□□□□ -1.64
CSDE1-213ENST00000530784 RRP15Q9Y3B9 282 aaKnown RBP4.8□□□□□ -1.64
CSDE1-213ENST00000530784 DYNC2H1Q8NCM8 4307 aaKnown RBP4.79□□□□□ -1.64
CSDE1-213ENST00000530784 IGHV3OR16-12A0A075B7B8 117 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 IGKV1-6A0A0C4DH72 117 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 TRDCB7Z8K6 153 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 SLC17A2O00624 439 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 AIREO43918 545 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 TSC22D2O75157 780 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 IGLV2-23P01705 113 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 TRBV12-3P01733 135 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 CRYGBP07316 175 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 GNAO1P09471 354 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 UCHL1P09936 223 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 APELAP0DMC3 54 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 MRPS15P82914 257 aaKnown RBP4.79□□□□□ -1.64
CSDE1-213ENST00000530784 RTL8BQ17RB0 113 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 VMA21Q3ZAQ7 101 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 LAIR2Q6ISS4 152 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 OR56B1Q8NGI3 324 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 OR4A4PQ8NGN8 299 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 OR2K2Q8NGT1 345 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 ARHGAP5-AS1Q96IT6 56 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 PECRQ9BY49 303 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 OR2D2Q9H210 308 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 SLC2A8Q9NY64 477 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 ANAPC11Q9NYG5 84 aa4.79□□□□□ -1.64
CSDE1-213ENST00000530784 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 IZUMO1RA6ND01 250 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 FAM223BA6NKX1 122 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 BET1O15155 118 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 FABP7O15540 132 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 CREBL2O60519 120 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-213ENST00000530784 ARL6IP5O75915 188 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 CDK1P06493 297 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 CD3GP09693 182 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 RRASP10301 218 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 CD37P11049 281 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 EXOSC2Q13868 293 aaKnown RBP4.78□□□□□ -1.64
CSDE1-213ENST00000530784 RAB11BQ15907 218 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 TNXAQ16473 311 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 LINC00322Q6ZN03 302 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-213ENST00000530784 FAM223AQ8IWN6 122 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 OR10J5Q8NHC4 309 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 DYNLRB2Q8TF09 96 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
CSDE1-213ENST00000530784 ACOT12Q8WYK0 555 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 UFD1Q92890 307 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 TMEM203Q969S6 136 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 FKBP14Q9NWM8 211 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 SDHAF2Q9NX18 166 aa4.78□□□□□ -1.64
CSDE1-213ENST00000530784 RBM7Q9Y580 266 aaKnown RBP4.78□□□□□ -1.64
CSDE1-213ENST00000530784 DENRO43583 198 aaKnown RBP4.77□□□□□ -1.65
CSDE1-213ENST00000530784 DIRAS3O95661 229 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 CRYZL1O95825 349 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 CD7P09564 240 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 PSMA1P25786 263 aaKnown RBP4.77□□□□□ -1.65
CSDE1-213ENST00000530784 UCP1P25874 307 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 RANBP1P43487 201 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 CLDN12P56749 244 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 UBE2KP61086 200 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 RHOGP84095 191 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 ATP5G2Q06055 141 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 TPBGQ13641 420 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 RCN1Q15293 331 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 ZNF79Q15937 498 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 PRSS8Q16651 343 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 LIPKQ5VXJ0 399 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 ETFRF1Q6IPR1 90 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 IDO2Q6ZQW0 420 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 DEFB125Q8N687 156 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 FAM3DQ96BQ1 224 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 RAB3CQ96E17 227 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 ADTRPQ96IZ2 230 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 SPIN2AQ99865 258 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 SPIN2BQ9BPZ2 258 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 GINS4Q9BRT9 223 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 VCXQ9H320 206 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 ZNF230Q9UIE0 474 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-213ENST00000530784 LSM2Q9Y333 95 aaKnown RBP4.77□□□□□ -1.65
CSDE1-213ENST00000530784 AK6Q9Y3D8 172 aaKnown RBP4.77□□□□□ -1.65
CSDE1-213ENST00000530784 SACSQ9NZJ4 4579 aa4.77□□□□□ -1.65
CSDE1-213ENST00000530784 TRBV6-7A0A0A0MS04 114 aa4.76□□□□□ -1.65
CSDE1-213ENST00000530784 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.76□□□□□ -1.65
CSDE1-213ENST00000530784 OR11H12B2RN74 326 aa4.76□□□□□ -1.65
CSDE1-213ENST00000530784 PRH1P02810 166 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms