RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 A0A1B0GXF2 115 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 OR5AL1P0C617 328 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 TIMM23BQ5SRD1 257 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 RNF183Q96D59 192 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 MRPL16Q9NX20 251 aaKnown RBP11.57□□□□□ -0.56
PCF11-204ENST00000530660 IGHV3-9P01782 118 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 CYC1P08574 325 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 CR1LQ2VPA4 569 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 KRTAP27-1Q3LI81 207 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 FAM162BQ5T6X4 162 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 TEPPQ6URK8 271 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 PCP2Q8IVA1 136 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 SPACA9Q96E40 222 aaPredicted RBP11.57□□□□□ -0.56
PCF11-204ENST00000530660 ADTRPQ96IZ2 230 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
PCF11-204ENST00000530660 ZFAND5O76080 213 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 C17orf82Q86X59 251 aaPredicted RBP11.56□□□□□ -0.56
PCF11-204ENST00000530660 BOD1L2Q8IYS8 172 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 OR4A16Q8NH70 328 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 OR10D3Q8NH80 312 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 SRXN1Q9BYN0 137 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 TMEM167BQ9NRX6 74 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 TNCP24821 2201 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 DOCK10Q96BY6 2186 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 HBBP68871 147 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 CATR1Q13166 79 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 Q6ZS52 159 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 PIP4P2Q8N4L2 257 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 C20orf78Q9BR46 151 aa11.56□□□□□ -0.56
PCF11-204ENST00000530660 PRUNE2Q8WUY3 3088 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 A0A0J9YW62 118 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 C9orf135Q5VTT2 229 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 CHCHD2Q9Y6H1 151 aaPredicted RBP11.55□□□□□ -0.56
PCF11-204ENST00000530660 SMAD7O15105 426 aaKnown RBP11.55□□□□□ -0.56
PCF11-204ENST00000530660 GFRA3O60609 400 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 GCSHP23434 173 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 FXYD2P54710 66 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 HES3Q5TGS1 186 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 ZNF497Q6ZNH5 498 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 TRAV3A0A0B4J244 114 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 H3BMG7 143 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 NKX2-8O15522 239 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 SLC25A17O43808 307 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 PLXDC1Q8IUK5 500 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 PGLYRP4Q96LB8 373 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 FOXB1Q99853 325 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 ZNF747Q9BV97 191 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 FAM234AQ9H0X4 552 aa11.55□□□□□ -0.56
PCF11-204ENST00000530660 KLRC4-KLRK1H3BQV0 150 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 CELA2AP08217 269 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 NMUP48645 174 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 HERV-K104P63124 156 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 EIF4EBP1Q13541 118 aaPredicted RBP11.54□□□□□ -0.56
PCF11-204ENST00000530660 Q6P435 159 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 MOB3BQ86TA1 216 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 NABP2Q9BQ15 211 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 OR2H2O95918 312 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 AMTNQ6UX39 209 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 PPP1R32Q7Z5V6 425 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 DEFB126Q9BYW3 111 aa11.54□□□□□ -0.56
PCF11-204ENST00000530660 KLF13Q9Y2Y9 288 aaPredicted RBP11.54□□□□□ -0.56
PCF11-204ENST00000530660 A8MWL6 223 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 MGST3O14880 152 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 WISP2O76076 250 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 LOXL2Q9Y4K0 774 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 IGHV3-43A0A0B4J1X8 118 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 NGFP01138 241 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 IGHV3-43DP0DP04 118 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
PCF11-204ENST00000530660 TMPRSS3P57727 454 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 TAS2R45P59539 299 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 PRR33A8MZF0 331 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 SPINK8P0C7L1 97 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 PRR20EP86478 221 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 PRR20CP86479 221 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 PRR20DP86480 221 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 PRR20BP86481 221 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 PRR20AP86496 221 aa11.53□□□□□ -0.56
PCF11-204ENST00000530660 TRAV5A0A0B4J249 113 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 FNDC10F2Z333 226 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 CHEK1O14757 476 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 DUX1O43812 170 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 CEBPDP49716 269 aaPredicted RBP11.52□□□□□ -0.56
PCF11-204ENST00000530660 CCL7P80098 99 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 MORN5Q5VZ52 161 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 GTSF1Q8WW33 167 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 JPT1Q9UK76 154 aa11.52□□□□□ -0.56
PCF11-204ENST00000530660 LMO7DNF2Z398 122 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 DKK1O94907 266 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 FKBP2P26885 142 aaKnown RBP11.52□□□□□ -0.57
PCF11-204ENST00000530660 PPIFP30405 207 aaKnown RBP11.52□□□□□ -0.57
PCF11-204ENST00000530660 FAM231DQ6ZW35 169 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 ZNF418Q8TF45 676 aaPredicted RBP11.52□□□□□ -0.57
PCF11-204ENST00000530660 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
PCF11-204ENST00000530660 AMMECR1Q9Y4X0 333 aaPredicted RBP11.52□□□□□ -0.57
PCF11-204ENST00000530660 ADAMTS20P59510 1910 aa11.52□□□□□ -0.57
PCF11-204ENST00000530660 MT-ATP8P03928 68 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms