RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 OR2F1Q13607 317 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 EXOSC2Q13868 293 aaKnown RBP8.29□□□□□ -1.08
SOX6-213ENST00000530378 KRTAP24-1Q3LI83 254 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 RPL7L1Q6DKI1 246 aaKnown RBP8.29□□□□□ -1.08
SOX6-213ENST00000530378 C18orf65Q6ZTR6 163 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 KCNRGQ8N5I3 272 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 RNASEH2CQ8TDP1 164 aaKnown RBP8.29□□□□□ -1.08
SOX6-213ENST00000530378 SCARB1Q8WTV0 552 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 SLC35E1Q96K37 410 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 GON7Q9BXV9 100 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 C16orf95Q9H693 158 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 RFNGQ9Y644 331 aa8.29□□□□□ -1.08
SOX6-213ENST00000530378 STAB1Q9NY15 2570 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 COL6A5A8TX70 2615 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 KANTRA0A1W2PQU2 76 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 A0A1W2PRX2 142 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 ANKRD34BA5PLL1 514 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 BCL2L11O43521 198 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 CD28P10747 220 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 PSMB8P28062 276 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 RAB9AP51151 201 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 RUNX1Q01196 453 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 GAMTQ14353 236 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 ZNF345Q14585 488 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 Q56UQ5 140 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 TCTEX1D4Q5JR98 221 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 TEX38Q6PEX7 206 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 HSD17B11Q8NBQ5 300 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 NECAP1Q8NC96 275 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 ATP5SQ99766 215 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 ZNF471Q9BX82 626 aaPredicted RBP8.28□□□□□ -1.08
SOX6-213ENST00000530378 UQCC1Q9NVA1 299 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 ZNF580Q9UK33 172 aa8.28□□□□□ -1.08
SOX6-213ENST00000530378 TRBV9A0A0B4J1U6 114 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 IGHV3-35A0A0C4DH35 117 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 CLPSL1A2RUU4 121 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 OR2T8A6NH00 312 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 PPP5D1E7EU14 171 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 CORTO00230 105 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 CYB5BO43169 146 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 HIST1H1BP16401 226 aaKnown RBP8.27□□□□□ -1.09
SOX6-213ENST00000530378 S100A11P31949 105 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 GPR183P32249 361 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 ATP5G2Q06055 141 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 PVRIGQ6DKI7 326 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 OR1L6Q8NGR2 347 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 NPIPB3Q92617 1050 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 TMEM147Q9BVK8 224 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 GNB4Q9HAV0 340 aa8.27□□□□□ -1.09
SOX6-213ENST00000530378 IGKV1OR2-108A0A075B7D4 117 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 A0A0D9SG52 128 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 TRBV12-3P01733 135 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 FGF7P21781 194 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 DLK1P80370 383 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 FOXE3Q13461 319 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 OPCMLQ14982 345 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 DEFB136Q30KP8 78 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 TREML4Q6UXN2 200 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 CLEC19AQ6UXS0 136 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 OR4X2Q8NGF9 303 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 CCDC140Q96MF4 163 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 CYTL1Q9NRR1 136 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 C21orf62Q9NYP8 219 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 THYN1Q9P016 225 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 RPS10-NUDT3A0A1W2PQS6 291 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 ATP5IP56385 69 aaPredicted RBP8.26□□□□□ -1.09
SOX6-213ENST00000530378 PROK1P58294 105 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 KRTAP10-3P60369 221 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 SPATA3Q8NHX4 192 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 RSG1Q9BU20 258 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 SH3BGRL3Q9H299 93 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 SLA2Q9H6Q3 261 aa8.26□□□□□ -1.09
SOX6-213ENST00000530378 IGHV3OR16-8A0A075B7F1 116 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 ZFP92A6NM28 416 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
SOX6-213ENST00000530378 H3BUA1 57 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 GNG7O60262 68 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 IFNA5P01569 189 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 ELANEP08246 267 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 GATA2P23769 480 aaPredicted RBP8.25□□□□□ -1.09
SOX6-213ENST00000530378 GPX4P36969 197 aaPredicted RBP8.25□□□□□ -1.09
SOX6-213ENST00000530378 ZNF90Q03938 601 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 TIGITQ495A1 244 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 ETFRF1Q6IPR1 90 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 BTNL8Q6UX41 500 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 ZNF502Q8TBZ5 544 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 EEF1AKMT3Q96AZ1 226 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 DUX3Q96PT4 197 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 MGST2Q99735 147 aa8.25□□□□□ -1.09
SOX6-213ENST00000530378 CITED2Q99967 270 aaPredicted RBP8.25□□□□□ -1.09
SOX6-213ENST00000530378 TCRBV4S1A1TA0A5B7 111 aa8.24□□□□□ -1.09
SOX6-213ENST00000530378 NUDT19A8MXV4 375 aa8.24□□□□□ -1.09
SOX6-213ENST00000530378 DFFBO76075 338 aa8.24□□□□□ -1.09
SOX6-213ENST00000530378 OR10J1P30954 320 aa8.24□□□□□ -1.09
SOX6-213ENST00000530378 MFAP4P55083 255 aa8.24□□□□□ -1.09
SOX6-213ENST00000530378 KIAA0141Q14154 515 aaPredicted RBP8.24□□□□□ -1.09
SOX6-213ENST00000530378 ZNF491Q8N8L2 437 aa8.24□□□□□ -1.09
SOX6-213ENST00000530378 WIPF2Q8TF74 440 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms