RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 MISP3Q96FF7 219 aa11.79□□□□□ -0.52
ECHDC1-220ENST00000528402 SSX3Q99909 188 aa11.79□□□□□ -0.52
ECHDC1-220ENST00000528402 PIMREGQ9BSJ6 248 aa11.79□□□□□ -0.52
ECHDC1-220ENST00000528402 BPESC1Q9GZL8 116 aa11.79□□□□□ -0.52
ECHDC1-220ENST00000528402 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 PSMB11A5LHX3 300 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 FAM106CPP0CH98 169 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 BRS3P32247 399 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 UBE2G2P60604 165 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 LCN2P80188 198 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 PRB3Q04118 309 aaPredicted RBP11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 KLRD1Q13241 179 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 ELOBQ15370 118 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 ADIRFQ15847 76 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 C10orf113Q5VZT2 155 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 ZNF562Q6V9R5 426 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 LHFPL4Q7Z7J7 247 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 BTF3L4Q96K17 158 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 CCL19Q99731 98 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 TNFRSF19Q9NS68 423 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 LY96Q9Y6Y9 160 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 ADGRG4Q8IZF6 3080 aa11.78□□□□□ -0.52
ECHDC1-220ENST00000528402 IGKV1D-37A0A075B6S9 117 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 IGHV4-39P01824 125 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 REG1AP05451 166 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 ATP5G3P48201 142 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 PLP1P60201 277 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 HES1Q14469 280 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 SPATA31B1PQ5VZV4 182 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 Q8N6K4 173 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 TMEM190Q8WZ59 177 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 PKD1L2Q7Z442 2459 aa11.77□□□□□ -0.52
ECHDC1-220ENST00000528402 FCN1O00602 326 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 NDUFB4O95168 129 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 CTRB1P17538 263 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 NPPCP23582 126 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 S100PP25815 95 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 FXYD3Q14802 87 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 CTRB2Q6GPI1 263 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 OR4X1Q8NH49 305 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 FAM168AQ92567 244 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 OR5B12Q96R08 314 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 TCEAL7Q9BRU2 100 aa11.77□□□□□ -0.53
ECHDC1-220ENST00000528402 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 TRBV24-1A0A075B6N3 115 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 NPIPB5A8MRT5 1133 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 H7BYZ3 331 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 OR7C2O60412 319 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 GATA2P23769 480 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 MFAP2P55001 183 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 DSCR9P59020 149 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 SSBP2P81877 361 aaPredicted RBP11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 PERPQ96FX8 193 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 TBX15Q96SF7 602 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 IMMP2LQ96T52 175 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 WNT10AQ9GZT5 417 aa11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 YTHDF2Q9Y5A9 579 aaKnown RBP11.76□□□□□ -0.53
ECHDC1-220ENST00000528402 NBEAQ8NFP9 2946 aa11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 TRAV30A0A087WSZ9 112 aa11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 C9JCJ5 164 aa11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 SRP14P37108 136 aaKnown RBP11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 CLEC2AQ6UVW9 174 aa11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 S100A7AQ86SG5 101 aa11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 Q8WTZ3 238 aa11.75□□□□□ -0.53
ECHDC1-220ENST00000528402 PLXNB1O43157 2135 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 I3L2K1 104 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 HYPMO75409 117 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 S100A6P06703 90 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 TMEM11P17152 192 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 RPS10P46783 165 aaKnown RBP11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 PAX8Q06710 450 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 LINC01551Q86U37 167 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 TTC9CQ8N5M4 171 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 OR51G1Q8NGK1 321 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 C10orf105Q8TEF2 133 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 FAM167A-AS1Q96KT0 104 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 OR51M1Q9H341 326 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 THYN1Q9P016 225 aa11.74□□□□□ -0.53
ECHDC1-220ENST00000528402 SCGB2A1O75556 95 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 PAX1P15863 534 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 ZNF90Q03938 601 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 KCNIP4Q6PIL6 250 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 PATE2Q6UY27 113 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 C16orf82Q7Z2V1 217 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 OR5AU1Q8NGC0 362 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 ZNF503Q96F45 646 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 FAM210BQ96KR6 192 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 TMEM68Q96MH6 324 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 PYGO2Q9BRQ0 406 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 SLC25A2Q9BXI2 301 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 ZNF355PQ9NSJ1 428 aa11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
ECHDC1-220ENST00000528402 A0A1W2PRD5 423 aa11.72□□□□□ -0.53
ECHDC1-220ENST00000528402 A0A1W2PRF3 423 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms