RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SRPXP78539 464 aa24.69■■□□□ 1.54
SSSCA1-205ENST00000527920 EDA2RQ9HAV5 297 aa24.69■■□□□ 1.54
SSSCA1-205ENST00000527920 PIGBOS1A0A0B4J2F0 54 aa24.68■■□□□ 1.54
SSSCA1-205ENST00000527920 IGHV7-4-1A0A0J9YVY3 117 aa24.68■■□□□ 1.54
SSSCA1-205ENST00000527920 ZNF207O43670 478 aaKnown RBP24.68■■□□□ 1.54
SSSCA1-205ENST00000527920 NBEAL2Q6ZNJ1 2754 aa24.68■■□□□ 1.54
SSSCA1-205ENST00000527920 A0A0B4J2A0 478 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 SULT1A3P0DMM9 295 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 SULT1A4P0DMN0 295 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 ANXA3P12429 323 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 AKR1C4P17516 323 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 FAM110AQ9BQ89 295 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 GINS3Q9BRX5 216 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 FNDC4Q9H6D8 234 aaPredicted RBP24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 SHPKQ9UHJ6 478 aa24.67■■□□□ 1.54
SSSCA1-205ENST00000527920 TMEM50AO95807 157 aa24.66■■□□□ 1.54
SSSCA1-205ENST00000527920 ZNF600Q6ZNG1 722 aa24.66■■□□□ 1.54
SSSCA1-205ENST00000527920 TMEM116Q8NCL8 245 aa24.66■■□□□ 1.54
SSSCA1-205ENST00000527920 RHPN1-AS1Q9BWJ2 59 aa24.66■■□□□ 1.54
SSSCA1-205ENST00000527920 HEYLQ9NQ87 328 aaPredicted RBP24.66■■□□□ 1.54
SSSCA1-205ENST00000527920 TRAV14DV4A0A0A6YYC5 116 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 OR4C46A6NHA9 309 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 CHEK1O14757 476 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 OPRK1P41145 380 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 C2orf83Q53S99 150 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 NMSQ5H8A3 153 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 SPANXN2Q5MJ10 180 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 OR4X1Q8NH49 305 aa24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 SLC25A21Q9BQT8 299 aaPredicted RBP24.65■■□□□ 1.54
SSSCA1-205ENST00000527920 CLN5O75503 358 aa24.64■■□□□ 1.54
SSSCA1-205ENST00000527920 CCR6P51684 374 aa24.64■■□□□ 1.54
SSSCA1-205ENST00000527920 TOMM20LQ6UXN7 152 aa24.64■■□□□ 1.54
SSSCA1-205ENST00000527920 LGI3Q8N145 548 aa24.64■■□□□ 1.54
SSSCA1-205ENST00000527920 RPS10-NUDT3A0A1W2PQS6 291 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 SCGB2A1O75556 95 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 BMI1P35226 326 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 TMEM128Q5BJH2 165 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 RNASEH2CQ8TDP1 164 aaKnown RBP24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 RNF2Q99496 336 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 GGTLC1Q9BX51 225 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 PRR13Q9NZ81 148 aa24.63■■□□□ 1.53
SSSCA1-205ENST00000527920 CEBPZOSA8MTT3 80 aa24.62■■□□□ 1.53
SSSCA1-205ENST00000527920 CD5P06127 495 aa24.62■■□□□ 1.53
SSSCA1-205ENST00000527920 SLC24A4Q8NFF2 622 aa24.62■■□□□ 1.53
SSSCA1-205ENST00000527920 ZFAND3Q9H8U3 227 aa24.62■■□□□ 1.53
SSSCA1-205ENST00000527920 PUS1Q9Y606 427 aaKnown RBP eCLIP24.62■■□□□ 1.53
SSSCA1-205ENST00000527920 DNAH7Q8WXX0 4024 aa24.62■■□□□ 1.53
SSSCA1-205ENST00000527920 LOC102724200A0A096LPH7 203 aaPredicted RBP24.61■■□□□ 1.53
SSSCA1-205ENST00000527920 SMCO1Q147U7 214 aa24.61■■□□□ 1.53
SSSCA1-205ENST00000527920 CASC10Q5T4H9 136 aa24.61■■□□□ 1.53
SSSCA1-205ENST00000527920 NOXA1Q86UR1 476 aa24.61■■□□□ 1.53
SSSCA1-205ENST00000527920 MRPL36Q9P0J6 103 aaKnown RBP24.61■■□□□ 1.53
SSSCA1-205ENST00000527920 HSPB7Q9UBY9 170 aa24.61■■□□□ 1.53
SSSCA1-205ENST00000527920 DUXBA0A1W2PPF3 345 aa24.6■■□□□ 1.53
SSSCA1-205ENST00000527920 LYL1P12980 280 aa24.6■■□□□ 1.53
SSSCA1-205ENST00000527920 ODF3L2Q3SX64 289 aa24.6■■□□□ 1.53
SSSCA1-205ENST00000527920 LYZL2Q7Z4W2 148 aa24.6■■□□□ 1.53
SSSCA1-205ENST00000527920 SRRQ9GZT4 340 aa24.6■■□□□ 1.53
SSSCA1-205ENST00000527920 RETNQ9HD89 108 aa24.6■■□□□ 1.53
SSSCA1-205ENST00000527920 TRAV30A0A087WSZ9 112 aa24.59■■□□□ 1.53
SSSCA1-205ENST00000527920 SLC25A4P12235 298 aa24.59■■□□□ 1.53
SSSCA1-205ENST00000527920 TNFRSF9Q07011 255 aa24.59■■□□□ 1.53
SSSCA1-205ENST00000527920 FAM90A2PQ658T7 463 aa24.59■■□□□ 1.53
SSSCA1-205ENST00000527920 TMED4Q7Z7H5 227 aa24.59■■□□□ 1.53
SSSCA1-205ENST00000527920 VSIRQ9H7M9 311 aa24.59■■□□□ 1.53
SSSCA1-205ENST00000527920 MLANAQ16655 118 aa24.58■■□□□ 1.53
SSSCA1-205ENST00000527920 A0A1B0GU03 582 aa24.57■■□□□ 1.52
SSSCA1-205ENST00000527920 NPY1RP25929 384 aa24.57■■□□□ 1.52
SSSCA1-205ENST00000527920 LRTM2Q8N967 370 aa24.57■■□□□ 1.52
SSSCA1-205ENST00000527920 TMEM170AQ8WVE7 144 aa24.57■■□□□ 1.52
SSSCA1-205ENST00000527920 IGHV3-49A0A0A0MS15 119 aa24.56■■□□□ 1.52
SSSCA1-205ENST00000527920 IGKV1-17P01599 117 aa24.56■■□□□ 1.52
SSSCA1-205ENST00000527920 U3KQ87 197 aa24.56■■□□□ 1.52
SSSCA1-205ENST00000527920 CMC4P56277 68 aaPredicted RBP24.55■■□□□ 1.52
SSSCA1-205ENST00000527920 ETFRF1Q6IPR1 90 aa24.55■■□□□ 1.52
SSSCA1-205ENST00000527920 PRSS54Q6PEW0 395 aa24.55■■□□□ 1.52
SSSCA1-205ENST00000527920 UBQLN2Q9UHD9 624 aa24.55■■□□□ 1.52
SSSCA1-205ENST00000527920 ATP5IP56385 69 aaPredicted RBP24.54■■□□□ 1.52
SSSCA1-205ENST00000527920 RBMS2Q15434 407 aaKnown RBP24.54■■□□□ 1.52
SSSCA1-205ENST00000527920 OR1S2Q8NGQ3 325 aa24.54■■□□□ 1.52
SSSCA1-205ENST00000527920 DTD1Q8TEA8 209 aa24.54■■□□□ 1.52
SSSCA1-205ENST00000527920 ST8SIA2Q92186 375 aa24.54■■□□□ 1.52
SSSCA1-205ENST00000527920 TMEM231Q9H6L2 316 aa24.54■■□□□ 1.52
SSSCA1-205ENST00000527920 NXPH3O95157 252 aa24.53■■□□□ 1.52
SSSCA1-205ENST00000527920 IGLC1P0CG04 106 aa24.53■■□□□ 1.52
SSSCA1-205ENST00000527920 SLC25A6P12236 298 aa24.53■■□□□ 1.52
SSSCA1-205ENST00000527920 VAMP1P23763 118 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 RND2P52198 227 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 APOC4P55056 127 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 PAFAH1B2P68402 229 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 TCF24Q7RTU0 167 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 RBKSQ9H477 322 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 NDUFA13Q9P0J0 144 aa24.52■■□□□ 1.52
SSSCA1-205ENST00000527920 IGHV3OR16-13A0A075B7E8 117 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 IGHV3-74A0A0B4J1X5 117 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 KIR2DL5BA0A0G2JN68 375 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 KIR2DL5BA0A0G2JPC4 375 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 A0A1W2PS18 150 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 NAP1L6A6NFF2 107 aa24.51■■□□□ 1.51
SSSCA1-205ENST00000527920 PITX3O75364 302 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms