RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 YIF1AO95070 293 aa19.78■□□□□ 0.76
TSPAN4-217ENST00000527644 INPP1P49441 399 aa19.78■□□□□ 0.76
TSPAN4-217ENST00000527644 NMSQ5H8A3 153 aa19.78■□□□□ 0.76
TSPAN4-217ENST00000527644 OR52B4Q8NGK2 314 aa19.78■□□□□ 0.76
TSPAN4-217ENST00000527644 OR10C1Q96KK4 312 aa19.78■□□□□ 0.76
TSPAN4-217ENST00000527644 ZNF207O43670 478 aaKnown RBP19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 OPRK1P41145 380 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 SMCO1Q147U7 214 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 BAK1Q16611 211 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 HAGHQ16775 308 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 TRIQKQ629K1 86 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 LAMTOR1Q6IAA8 161 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 DEFB125Q8N687 156 aa19.77■□□□□ 0.76
TSPAN4-217ENST00000527644 TMEM50AO95807 157 aa19.76■□□□□ 0.75
TSPAN4-217ENST00000527644 C2orf83Q53S99 150 aa19.76■□□□□ 0.75
TSPAN4-217ENST00000527644 HIPK2Q9H2X6 1198 aa19.76■□□□□ 0.75
TSPAN4-217ENST00000527644 FNDC4Q9H6D8 234 aaPredicted RBP19.76■□□□□ 0.75
TSPAN4-217ENST00000527644 SMPXQ9UHP9 88 aa19.76■□□□□ 0.75
TSPAN4-217ENST00000527644 DUXBA0A1W2PPF3 345 aa19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 NAP1L6A6NFF2 107 aa19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 TSPAN4O14817 238 aa19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 RBMS2Q15434 407 aaKnown RBP19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 LINC00322Q6ZN03 302 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 SLC24A4Q8NFF2 622 aa19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 OR4X1Q8NH49 305 aa19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 SPAG8Q99932 426 aaPredicted RBP19.75■□□□□ 0.75
TSPAN4-217ENST00000527644 IGHV7-4-1A0A0J9YVY3 117 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 RPS10-NUDT3A0A1W2PQS6 291 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 CLN5O75503 358 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 VAMP1P23763 118 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 TNFRSF9Q07011 255 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 MLANAQ16655 118 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 ZNF600Q6ZNG1 722 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 LRTM2Q8N967 370 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 TMEM116Q8NCL8 245 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 RNASEH2CQ8TDP1 164 aaKnown RBP19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 WFDC10AQ9H1F0 79 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 SRD5A3Q9H8P0 318 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 HSPB7Q9UBY9 170 aa19.74■□□□□ 0.75
TSPAN4-217ENST00000527644 TRAV14DV4A0A0A6YYC5 116 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 A0A1B0GU03 582 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 SCGB2A1O75556 95 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 NXPH3O95157 252 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 TOMM20LQ6UXN7 152 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 NOXA1Q86UR1 476 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 CENPSQ8N2Z9 138 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 SDHCQ99643 169 aaPredicted RBP19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 SPATA25Q9BR10 227 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 GINS3Q9BRX5 216 aa19.73■□□□□ 0.75
TSPAN4-217ENST00000527644 SFT2D2O95562 160 aa19.72■□□□□ 0.75
TSPAN4-217ENST00000527644 RHPN1-AS1Q9BWJ2 59 aa19.72■□□□□ 0.75
TSPAN4-217ENST00000527644 MRPL36Q9P0J6 103 aaKnown RBP19.72■□□□□ 0.75
TSPAN4-217ENST00000527644 CHEK1O14757 476 aa19.71■□□□□ 0.75
TSPAN4-217ENST00000527644 UBE2MP61081 183 aaKnown RBP19.71■□□□□ 0.75
TSPAN4-217ENST00000527644 PPP1R1AQ13522 171 aa19.71■□□□□ 0.75
TSPAN4-217ENST00000527644 OR1S1Q8NH92 325 aa19.71■□□□□ 0.75
TSPAN4-217ENST00000527644 PUS1Q9Y606 427 aaKnown RBP eCLIP19.71■□□□□ 0.75
TSPAN4-217ENST00000527644 U3KQ87 197 aa19.71■□□□□ 0.75
TSPAN4-217ENST00000527644 TRAV30A0A087WSZ9 112 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 RBMY1BA6NDE4 496 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 RBMY1EA6NEQ0 496 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 RBMY1DP0C7P1 496 aaKnown RBP19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 SLC25A4P12235 298 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 NPY1RP25929 384 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 DTD1Q8TEA8 209 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 TMEM170AQ8WVE7 144 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 RNF2Q99496 336 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 RBKSQ9H477 322 aa19.7■□□□□ 0.74
TSPAN4-217ENST00000527644 CENPXA8MT69 81 aa19.69■□□□□ 0.74
TSPAN4-217ENST00000527644 NDUFB6O95139 128 aa19.69■□□□□ 0.74
TSPAN4-217ENST00000527644 SLC25A6P12236 298 aa19.69■□□□□ 0.74
TSPAN4-217ENST00000527644 ETFRF1Q6IPR1 90 aa19.69■□□□□ 0.74
TSPAN4-217ENST00000527644 C7orf50Q9BRJ6 194 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-217ENST00000527644 ZFAND3Q9H8U3 227 aa19.69■□□□□ 0.74
TSPAN4-217ENST00000527644 IGHV3-49A0A0A0MS15 119 aa19.68■□□□□ 0.74
TSPAN4-217ENST00000527644 PITX3O75364 302 aa19.68■□□□□ 0.74
TSPAN4-217ENST00000527644 IFNA10P01566 189 aa19.68■□□□□ 0.74
TSPAN4-217ENST00000527644 BMI1P35226 326 aa19.68■□□□□ 0.74
TSPAN4-217ENST00000527644 PRSS54Q6PEW0 395 aa19.68■□□□□ 0.74
TSPAN4-217ENST00000527644 TMED3Q9Y3Q3 217 aa19.68■□□□□ 0.74
TSPAN4-217ENST00000527644 LINC00854A0A1B0GVQ3 168 aa19.67■□□□□ 0.74
TSPAN4-217ENST00000527644 OR4C46A6NHA9 309 aa19.67■□□□□ 0.74
TSPAN4-217ENST00000527644 IL7P13232 177 aa19.67■□□□□ 0.74
TSPAN4-217ENST00000527644 ATP5IP56385 69 aaPredicted RBP19.67■□□□□ 0.74
TSPAN4-217ENST00000527644 NBEAL2Q6ZNJ1 2754 aa19.66■□□□□ 0.74
TSPAN4-217ENST00000527644 IGKV1-17P01599 117 aa19.66■□□□□ 0.74
TSPAN4-217ENST00000527644 CD5P06127 495 aa19.66■□□□□ 0.74
TSPAN4-217ENST00000527644 CITED4Q96RK1 184 aa19.66■□□□□ 0.74
TSPAN4-217ENST00000527644 RND2P52198 227 aa19.65■□□□□ 0.74
TSPAN4-217ENST00000527644 TIGITQ495A1 244 aa19.65■□□□□ 0.74
TSPAN4-217ENST00000527644 OR1S2Q8NGQ3 325 aa19.65■□□□□ 0.74
TSPAN4-217ENST00000527644 VSIRQ9H7M9 311 aa19.65■□□□□ 0.74
TSPAN4-217ENST00000527644 IGHV3OR16-13A0A075B7E8 117 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 IGHV3-74A0A0B4J1X5 117 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 FAM90A26D6RGX4 464 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 IGLC1P0CG04 106 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 FAM90A2PQ658T7 463 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 FAM110AQ9BQ89 295 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 FLVCR2Q9UPI3 526 aa19.64■□□□□ 0.73
TSPAN4-217ENST00000527644 C9orf170A2RU37 121 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms