RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 KIF15Q9NS87 1388 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PBRM1Q86U86 1689 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ZSWIM8A7E2V4 1837 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV36DV7A0A075B6V5 113 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV13-1A0A0B4J241 112 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV5A0A0B4J249 113 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV41A0A0B4J266 112 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRAV17A0A0B4J275 112 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 IGKV1-6A0A0C4DH72 117 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A0G2JMM0 328 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A0J9YW62 118 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 LOC102725191A0A1B0GVB3 256 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1W2PPB8 328 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 A0A1W2PRE2 83 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 GRIFINA4D1Z8 144 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR2T8A6NH00 312 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 FABP5P3A8MUU1 101 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 KIR3DP1A8MWS1 328 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 MIF4GDA9UHW6 222 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00587B1AMM8 73 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 C9JAW5 83 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 FNDC10F2Z333 226 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM250H0YL14 139 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 H3BMG7 143 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 H3BQ85 93 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 H7BYZ3 331 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM256-PLSCR3K7ERE1 68 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 M0R233 179 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ISLRO14498 428 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 UBFD1O14562 309 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TAX1BP3O14907 124 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RER1O15258 196 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 PLA2G10O15496 165 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 LYRM1O43325 122 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SH2D1AO60880 128 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TNFSF15O95150 251 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 GADD45GO95257 159 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 HAND1O96004 215 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SOD1P00441 154 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RBP4P02753 201 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OPN1SWP03999 348 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 PRM2P04554 102 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CSN2P05814 226 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CD2P06729 351 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 UCHL1P09936 223 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TRGC1P0CF51 173 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 BCL2P10415 239 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 DEFA4P12838 97 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TPT1P13693 172 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RPL7P18124 248 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 GZMHP20718 246 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RPS4Y1P22090 263 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CKS2P33552 79 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OPRM1P35372 400 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ARPP19P56211 112 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 FXYD7P58549 80 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TPPP2P59282 170 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM258P61165 79 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RRAS2P62070 204 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 RPS24P62847 133 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ERHP84090 104 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 HOXC5Q00444 222 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC38A11Q08AI6 406 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CST6Q15828 149 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 IQCJQ1A5X6 159 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 C12orf74Q32Q52 190 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 CLLU1Q5K131 121 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SPANXN3Q5MJ09 141 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 S100A7L2Q5SY68 101 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM244Q5VVB8 128 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM42Q69YG0 159 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 Q6Q795 121 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF322Q6U7Q0 402 aaPredicted RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TEX261Q6UWH6 196 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 LCN15Q6UWW0 184 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SOSTDC1Q6X4U4 206 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF550Q7Z398 422 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ADM2Q7Z4H4 148 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 LRRC18Q8N456 261 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 DEFB125Q8N687 156 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00337Q8N6G1 96 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 YIPF7Q8N8F6 280 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC30A7Q8NEW0 376 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5A1Q8NGJ0 315 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR51T1Q8NGJ9 327 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR5D16Q8NGK9 328 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4C16Q8NGL9 310 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 OR2T35Q8NGX2 323 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 STAG3L4Q8TBR4 150 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPL30Q8TCC3 161 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 COPS9Q8WXC6 57 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 H1FXQ92522 213 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC7A6Q92536 515 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 MAGOHBQ96A72 148 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 TOMM6Q96B49 74 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 MRPS24Q96EL2 167 aaKnown RBP0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 ZC2HC1AQ96GY0 325 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 DNAJC30Q96LL9 226 aa0.69□□□□□ -2.3
ECHDC1-219ENST00000526299 C2orf50Q96LR7 162 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms