RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 LGI3Q8N145 548 aa13.18□□□□□ -0.3
NR1H3-228ENST00000525441 OR52B4Q8NGK2 314 aa13.18□□□□□ -0.3
NR1H3-228ENST00000525441 SLC25A21Q9BQT8 299 aaPredicted RBP13.18□□□□□ -0.3
NR1H3-228ENST00000525441 HEYLQ9NQ87 328 aaPredicted RBP13.18□□□□□ -0.3
NR1H3-228ENST00000525441 TBC1D24Q9ULP9 559 aa13.18□□□□□ -0.3
NR1H3-228ENST00000525441 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
NR1H3-228ENST00000525441 A0A0B4J2A0 478 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 CENPXA8MT69 81 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 CEBPZOSA8MTT3 80 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 OR11H12B2RN74 326 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 SCGB2A1O75556 95 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 YIF1AO95070 293 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 SCAF4O95104 1147 aaKnown RBP13.17□□□□□ -0.3
NR1H3-228ENST00000525441 ASAH1Q13510 395 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 TM2D3Q9BRN9 247 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 SHPKQ9UHJ6 478 aa13.17□□□□□ -0.3
NR1H3-228ENST00000525441 LINC00854A0A1B0GVQ3 168 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 LYRM1O43325 122 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 OPRK1P41145 380 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 CCR6P51684 374 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 SUPT4H1P63272 117 aaKnown RBP13.16□□□□□ -0.3
NR1H3-228ENST00000525441 BSXQ3C1V8 233 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 TMEM128Q5BJH2 165 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 SPAG8Q99932 426 aaPredicted RBP13.16□□□□□ -0.3
NR1H3-228ENST00000525441 SPATA25Q9BR10 227 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 PRR13Q9NZ81 148 aa13.16□□□□□ -0.3
NR1H3-228ENST00000525441 TENM3Q9P273 2699 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 IGHV3OR16-8A0A075B7F1 116 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 RPS10-NUDT3A0A1W2PQS6 291 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.3
NR1H3-228ENST00000525441 SMCO1Q147U7 214 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 HAGHQ16775 308 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 NOXA1Q86UR1 476 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 DEFB125Q8N687 156 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 GINS3Q9BRX5 216 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 HIPK2Q9H2X6 1198 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 SRD5A3Q9H8P0 318 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 SMPXQ9UHP9 88 aa13.15□□□□□ -0.3
NR1H3-228ENST00000525441 DUXBA0A1W2PPF3 345 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 TSPAN4O14817 238 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 VAMP1P23763 118 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 BTCP35070 178 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 BMI1P35226 326 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 DEFA1P59665 94 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 DEFA3P59666 94 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 C2orf83Q53S99 150 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 NMSQ5H8A3 153 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 LYZL2Q7Z4W2 148 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 TMEM116Q8NCL8 245 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 SLC24A4Q8NFF2 622 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 OR10C1Q96KK4 312 aa13.14□□□□□ -0.31
NR1H3-228ENST00000525441 TRAV14DV4A0A0A6YYC5 116 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 IGHV7-4-1A0A0J9YVY3 117 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 A0A1B0GU03 582 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 TMEM50AO95807 157 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 RBMS2Q15434 407 aaKnown RBP13.13□□□□□ -0.31
NR1H3-228ENST00000525441 MZT2BQ6NZ67 158 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
NR1H3-228ENST00000525441 RNASEH2CQ8TDP1 164 aaKnown RBP13.13□□□□□ -0.31
NR1H3-228ENST00000525441 CLN5O75503 358 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 NXPH3O95157 252 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 TNFRSF9Q07011 255 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 LINC00322Q6ZN03 302 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-228ENST00000525441 OR1S1Q8NH92 325 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 RHPN1-AS1Q9BWJ2 59 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 WFDC10AQ9H1F0 79 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
NR1H3-228ENST00000525441 HSPB7Q9UBY9 170 aa13.12□□□□□ -0.31
NR1H3-228ENST00000525441 TRAV30A0A087WSZ9 112 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 OR4C46A6NHA9 309 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 CHEK1O14757 476 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 SLC25A4P12235 298 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 NPY1RP25929 384 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 UBE2MP61081 183 aaKnown RBP13.11□□□□□ -0.31
NR1H3-228ENST00000525441 ETFRF1Q6IPR1 90 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 TOMM20LQ6UXN7 152 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 LRTM2Q8N967 370 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 ZNF414Q96IQ9 312 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 PUS1Q9Y606 427 aaKnown RBP eCLIP13.11□□□□□ -0.31
NR1H3-228ENST00000525441 U3KQ87 197 aa13.11□□□□□ -0.31
NR1H3-228ENST00000525441 RBMY1BA6NDE4 496 aaKnown RBP13.1□□□□□ -0.31
NR1H3-228ENST00000525441 RBMY1EA6NEQ0 496 aaKnown RBP13.1□□□□□ -0.31
NR1H3-228ENST00000525441 NDUFB6O95139 128 aa13.1□□□□□ -0.31
NR1H3-228ENST00000525441 SFT2D2O95562 160 aa13.1□□□□□ -0.31
NR1H3-228ENST00000525441 IFNA10P01566 189 aa13.1□□□□□ -0.31
NR1H3-228ENST00000525441 CD5P06127 495 aa13.1□□□□□ -0.31
NR1H3-228ENST00000525441 RBMY1DP0C7P1 496 aaKnown RBP13.1□□□□□ -0.31
NR1H3-228ENST00000525441 DTD1Q8TEA8 209 aa13.1□□□□□ -0.31
NR1H3-228ENST00000525441 HUWE1Q7Z6Z7 4374 aaKnown RBP13.1□□□□□ -0.31
NR1H3-228ENST00000525441 IGHV3-49A0A0A0MS15 119 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 C3orf84H3BNL1 204 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 SLC25A6P12236 298 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 ATP5IP56385 69 aaPredicted RBP13.09□□□□□ -0.31
NR1H3-228ENST00000525441 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 MLANAQ16655 118 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 CITED4Q96RK1 184 aa13.09□□□□□ -0.31
NR1H3-228ENST00000525441 RNF2Q99496 336 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms