RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 PAX9P55771 341 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 RAB25P57735 213 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 RND3P61587 244 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 DEFA5Q01523 94 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 PPP1R1AQ13522 171 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 HES1Q14469 280 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 MEF2DQ14814 521 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 PSG5Q15238 335 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 SURF2Q15527 256 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 MMDQ15546 238 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 MSMO1Q15800 293 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 C5orf64Q2M2E5 130 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 ANKRD55Q3KP44 614 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 ABCA11PQ4W5N1 156 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 PDLIM3Q53GG5 364 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 C16orf87Q6PH81 154 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 C19orf35Q6ZS72 473 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 SSX9Q7RTT3 188 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 SLC25A42Q86VD7 318 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 PDPNQ86YL7 162 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 FAM219AQ8IW50 185 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 SLC38A6Q8IZM9 456 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 Q8N2B8 174 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM86BQ8N661 226 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 DUSP18Q8NEJ0 188 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 NPBQ8NG41 125 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 OR2T10Q8NGZ9 312 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 LINC01006Q8NI28 216 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 DEDD2Q8WXF8 326 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 BORCS5Q969J3 196 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 GALNT14Q96FL9 552 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF486Q96H40 463 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 AKR1E2Q96JD6 320 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 NOL4LQ96MY1 436 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 CLCC1Q96S66 551 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 TSC22D3Q99576 134 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 HSD17B10Q99714 261 aaKnown RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 PRRT1Q99946 306 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 C7orf50Q9BRJ6 194 aaKnown RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 SEC22CQ9BRL7 303 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 FAM103A1Q9BTL3 118 aaKnown RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 GHITMQ9H3K2 345 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 NAA60Q9H7X0 242 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 ZNF430Q9H8G1 570 aaPredicted RBP2.24□□□□□ -2.05
CSDE1-208ENST00000524652 NSG2Q9Y328 171 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 WASHC3Q9Y3C0 194 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 ABCA13Q86UQ4 5058 aa2.24□□□□□ -2.05
CSDE1-208ENST00000524652 DYNC2H1Q8NCM8 4307 aaKnown RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 C9orf170A2RU37 121 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 NAP1L6A6NFF2 107 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 NCBP2LA6PVI3 153 aaKnown RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 KLLNB2CW77 178 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 G3V318 75 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TRIM77I1YAP6 450 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 RBFOX2O43251 390 aaKnown RBP eCLIP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 FGF16O43320 207 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 ADAP1O75689 374 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TSPAN9O75954 239 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 SLC22A5O76082 557 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 KBTBD11O94819 623 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 SFT2D2O95562 160 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 CDS2O95674 445 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 HPRT1P00492 218 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 KRASP01116 189 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 IGHG2P01859 326 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 HLA-DRB1P01911 266 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 APOA2P02652 100 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OPN1MWP04001 364 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OR4E1P0C645 316 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 APELAP0DMC3 54 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OPN1MW2P0DN77 364 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OPN1MW3P0DN78 364 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 AKR1C4P17516 323 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 BRS3P32247 399 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 MC5RP33032 325 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 FAUP35544 74 aaKnown RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 INPP1P49441 399 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 AP3S2P59780 193 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OR2B8PP59922 312 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 UBE2KP61086 200 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 CATR1Q13166 79 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 DHRS2Q13268 280 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 POU2AF1Q16633 256 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TMEM128Q5BJH2 165 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 NMSQ5H8A3 153 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 DHRS7BQ6IAN0 325 aaPredicted RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OR4A47Q6IF82 309 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 LYZL2Q7Z4W2 148 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TMED4Q7Z7H5 227 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 PPP1R27Q86WC6 154 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 SELENOHQ8IZQ5 122 aaKnown RBP2.23□□□□□ -2.05
CSDE1-208ENST00000524652 CENPSQ8N2Z9 138 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 TEX29Q8N6K0 151 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 POM121L12Q8N7R1 296 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 SLC35G3Q8N808 338 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 POC5Q8NA72 575 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 Q8NBF4 154 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OR10W1Q8NGF6 305 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OR4C13Q8NGP0 309 aa2.23□□□□□ -2.05
CSDE1-208ENST00000524652 OR4S2Q8NH73 311 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 197.8 ms