RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 FUSP35637 526 aaKnown RBP eCLIP8.23□□□□□ -1.09
SDCBP-211ENST00000523441 DAD1P61803 113 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 ERHP84090 104 aaKnown RBP8.23□□□□□ -1.09
SDCBP-211ENST00000523441 MSMO1Q15800 293 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 PHLDA2Q53GA4 152 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 FAM210BQ96KR6 192 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 EHFQ9NZC4 300 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 TPRKBQ9Y3C4 175 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 RFNGQ9Y644 331 aa8.23□□□□□ -1.09
SDCBP-211ENST00000523441 SNCAP37840 140 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 MLANAQ16655 118 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 IZUMO4Q1ZYL8 232 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 TIGITQ495A1 244 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 GDF5OSQ5U4N7 250 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 H2BFWTQ7Z2G1 175 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 HOGA1Q86XE5 327 aa8.22□□□□□ -1.09
SDCBP-211ENST00000523441 C7orf50Q9BRJ6 194 aaKnown RBP8.22□□□□□ -1.09
SDCBP-211ENST00000523441 MRPL36Q9P0J6 103 aaKnown RBP8.22□□□□□ -1.09
SDCBP-211ENST00000523441 YTHDF2Q9Y5A9 579 aaKnown RBP8.22□□□□□ -1.09
SDCBP-211ENST00000523441 LOC102723971A0A1B0GUV8 181 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 TMEM189A5PLL7 270 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 H3BMM0 161 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 PMP2P02689 132 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 FGF2P09038 288 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 FGF9P31371 208 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-211ENST00000523441 RFX2P48378 723 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 EIF2B2P49770 351 aaKnown RBP8.21□□□□□ -1.1
SDCBP-211ENST00000523441 SNRPD3P62318 126 aaKnown RBP8.21□□□□□ -1.1
SDCBP-211ENST00000523441 PRCDQ00LT1 54 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 OR4B1Q8NGF8 309 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 LINC00052Q96N35 136 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 TSC22D3Q99576 134 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF2Q9BSG1 426 aaPredicted RBP8.21□□□□□ -1.1
SDCBP-211ENST00000523441 IFT46Q9NQC8 304 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 C8orf4Q9NR00 106 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 RHBDL2Q9NX52 303 aa8.21□□□□□ -1.1
SDCBP-211ENST00000523441 RRP15Q9Y3B9 282 aaKnown RBP8.21□□□□□ -1.1
SDCBP-211ENST00000523441 FAM90A26D6RGX4 464 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 CRYBB3P26998 211 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 OPRK1P41145 380 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF705AQ6ZN79 300 aaPredicted RBP8.2□□□□□ -1.1
SDCBP-211ENST00000523441 SLC35G3Q8N808 338 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 OR5AP2Q8NGF4 316 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 OR5H6Q8NGV6 325 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 MRGPRFQ96AM1 343 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 SLC35B3Q9H1N7 401 aa8.2□□□□□ -1.1
SDCBP-211ENST00000523441 NOTOA8MTQ0 251 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF705FA8MVS1 300 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-211ENST00000523441 SCGNO76038 276 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 HBE1P02100 147 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 PRM2P04554 102 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF705DP0CH99 300 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF705BP0CI00 300 aaPredicted RBP8.19□□□□□ -1.1
SDCBP-211ENST00000523441 DEFB130BP0DP73 79 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 DEFB130AP0DP74 79 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 HSPE1P61604 102 aaKnown RBP8.19□□□□□ -1.1
SDCBP-211ENST00000523441 MXD1Q05195 221 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 CMTM1Q8IZ96 169 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 ZNF114Q8NC26 417 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 BORCS5Q969J3 196 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 NEU1Q99519 415 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 FXYD6Q9H0Q3 95 aa8.19□□□□□ -1.1
SDCBP-211ENST00000523441 TEX48A0A1B0GUV7 120 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 TRDV1A0A1B0GX56 115 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 SMIM9A6NGZ8 99 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 F5H768 121 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 GPR31O00270 319 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 HNRNPCP07910 306 aaKnown RBP eCLIP8.18□□□□□ -1.1
SDCBP-211ENST00000523441 HLA-DRB4P13762 266 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 HOXA1P49639 335 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-211ENST00000523441 OGFRL1Q5TC84 451 aaPredicted RBP8.18□□□□□ -1.1
SDCBP-211ENST00000523441 C16orf54Q6UWD8 224 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 C15orf53Q8NAA6 179 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 GLMPQ8WWB7 406 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 TMEM208Q9BTX3 173 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 DUSP21Q9H596 190 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 GOLT1BQ9Y3E0 138 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 HLA-DRB4X5D2U9 266 aa8.18□□□□□ -1.1
SDCBP-211ENST00000523441 FAT1Q14517 4588 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 CLN5O75503 358 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 IGKV1-39P01597 117 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 IGKV1D-39P04432 117 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 CLEC2LP0C7M8 214 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 ETV6P41212 452 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 CLINT1Q14677 625 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 RRN3P1Q2M238 152 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 IDNKQ5T6J7 187 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 Q5VSD8 79 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 SFXN4Q6P4A7 337 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 SIGLEC15Q6ZMC9 328 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 PRSS48Q7RTY5 328 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 TBC1D26Q86UD7 250 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 SEC22AQ96IW7 307 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 UHRF2Q96PU4 802 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 MAGT1Q9H0U3 335 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 VCXQ9H320 206 aa8.17□□□□□ -1.1
SDCBP-211ENST00000523441 FNDC4Q9H6D8 234 aaPredicted RBP8.17□□□□□ -1.1
SDCBP-211ENST00000523441 AUNIPQ9H7T9 357 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms