RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 UBE2NLQ5JXB2 153 aa18.71■□□□□ 0.59
PVT1-219ENST00000523427 SAMD12Q8N8I0 201 aa18.71■□□□□ 0.59
PVT1-219ENST00000523427 TMEM230Q96A57 120 aa18.71■□□□□ 0.59
PVT1-219ENST00000523427 DNAH2Q9P225 4427 aa18.71■□□□□ 0.59
PVT1-219ENST00000523427 PKHD1P08F94 4074 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 NEDD8Q15843 81 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 MLANAQ16655 118 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 C12orf74Q32Q52 190 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 LPCAT3Q6P1A2 487 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 POM121L12Q8N7R1 296 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 SLC35G3Q8N808 338 aa18.7■□□□□ 0.58
PVT1-219ENST00000523427 MRPL36Q9P0J6 103 aaKnown RBP18.7■□□□□ 0.58
PVT1-219ENST00000523427 IFNA17P01571 189 aa18.69■□□□□ 0.58
PVT1-219ENST00000523427 FAM212BQ9NTI7 297 aaPredicted RBP18.69■□□□□ 0.58
PVT1-219ENST00000523427 DNAH17Q9UFH2 4485 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 RTL8CO15255 209 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 P0DMU3 169 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 FAM231AP0DMU4 169 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 FAM231CP0DMU5 169 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 GRAMD2BQ96HH9 432 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 NARS2Q96I59 477 aaKnown RBP18.68■□□□□ 0.58
PVT1-219ENST00000523427 MUC4Q99102 2169 aa18.68■□□□□ 0.58
PVT1-219ENST00000523427 ETV6P41212 452 aa18.67■□□□□ 0.58
PVT1-219ENST00000523427 DHRS2Q13268 280 aa18.67■□□□□ 0.58
PVT1-219ENST00000523427 PSMG4Q5JS54 123 aa18.67■□□□□ 0.58
PVT1-219ENST00000523427 CSNK1G2-AS1Q8NCQ2 148 aa18.67■□□□□ 0.58
PVT1-219ENST00000523427 NDUFAF3Q9BU61 184 aa18.67■□□□□ 0.58
PVT1-219ENST00000523427 AMBPP02760 352 aa18.66■□□□□ 0.58
PVT1-219ENST00000523427 CRYBB3P26998 211 aa18.66■□□□□ 0.58
PVT1-219ENST00000523427 OPRK1P41145 380 aa18.66■□□□□ 0.58
PVT1-219ENST00000523427 HOXA1P49639 335 aaPredicted RBP18.66■□□□□ 0.58
PVT1-219ENST00000523427 DCANP1Q8TF63 244 aa18.66■□□□□ 0.58
PVT1-219ENST00000523427 RAB40CQ96S21 281 aa18.66■□□□□ 0.58
PVT1-219ENST00000523427 CLN5O75503 358 aa18.65■□□□□ 0.58
PVT1-219ENST00000523427 IGKV1-5P01602 117 aa18.65■□□□□ 0.58
PVT1-219ENST00000523427 RNASE2P10153 161 aaKnown RBP18.65■□□□□ 0.58
PVT1-219ENST00000523427 AKR1C2P52895 323 aa18.65■□□□□ 0.58
PVT1-219ENST00000523427 SUB1P53999 127 aaKnown RBP eCLIP18.65■□□□□ 0.58
PVT1-219ENST00000523427 TIGITQ495A1 244 aa18.65■□□□□ 0.58
PVT1-219ENST00000523427 PDCD10Q9BUL8 212 aa18.65■□□□□ 0.58
PVT1-219ENST00000523427 FNDC4Q9H6D8 234 aaPredicted RBP18.65■□□□□ 0.58
PVT1-219ENST00000523427 XCL2Q9UBD3 114 aa18.65■□□□□ 0.58
PVT1-219ENST00000523427 IGLV2-18A0A075B6J9 118 aa18.64■□□□□ 0.57
PVT1-219ENST00000523427 A0A0B4J293 547 aa18.64■□□□□ 0.57
PVT1-219ENST00000523427 PGAM2P15259 253 aa18.64■□□□□ 0.57
PVT1-219ENST00000523427 PI3P19957 117 aa18.64■□□□□ 0.57
PVT1-219ENST00000523427 CORTO00230 105 aa18.63■□□□□ 0.57
PVT1-219ENST00000523427 RPS19P39019 145 aaKnown RBP18.63■□□□□ 0.57
PVT1-219ENST00000523427 LSM3P62310 102 aaKnown RBP18.63■□□□□ 0.57
PVT1-219ENST00000523427 SNX29P2Q8IUI4 249 aa18.63■□□□□ 0.57
PVT1-219ENST00000523427 CROCCP3Q8IVE0 287 aa18.63■□□□□ 0.57
PVT1-219ENST00000523427 ENY2Q9NPA8 101 aa18.63■□□□□ 0.57
PVT1-219ENST00000523427 HELTA6NFD8 242 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 TMEM127O75204 238 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 IFNA10P01566 189 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 NPY1RP25929 384 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 EMP1P54849 157 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 UBE2DNLQ8IWF7 75 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 GPX8Q8TED1 209 aa18.62■□□□□ 0.57
PVT1-219ENST00000523427 YTHDF1Q9BYJ9 559 aaKnown RBP18.62■□□□□ 0.57
PVT1-219ENST00000523427 M0QYG6 137 aa18.61■□□□□ 0.57
PVT1-219ENST00000523427 SCGB2A1O75556 95 aa18.61■□□□□ 0.57
PVT1-219ENST00000523427 EIF2B2P49770 351 aaKnown RBP18.61■□□□□ 0.57
PVT1-219ENST00000523427 OR4X1Q8NH49 305 aa18.61■□□□□ 0.57
PVT1-219ENST00000523427 Q9H521 79 aa18.61■□□□□ 0.57
PVT1-219ENST00000523427 DYNC1H1Q14204 4646 aaKnown RBP18.61■□□□□ 0.57
PVT1-219ENST00000523427 IGKV1-17P01599 117 aa18.6■□□□□ 0.57
PVT1-219ENST00000523427 UCP3P55916 312 aa18.6■□□□□ 0.57
PVT1-219ENST00000523427 TP53RKQ96S44 253 aa18.6■□□□□ 0.57
PVT1-219ENST00000523427 DNAH11Q96DT5 4516 aa18.59■□□□□ 0.57
PVT1-219ENST00000523427 RNASE12Q5GAN4 147 aaKnown RBP18.59■□□□□ 0.57
PVT1-219ENST00000523427 COMMD3Q9UBI1 195 aa18.59■□□□□ 0.57
PVT1-219ENST00000523427 SMIM31A0A1B0GVY4 71 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 IFNA21P01568 189 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 PIGPP57054 158 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 NUTF2P61970 127 aaKnown RBP18.58■□□□□ 0.56
PVT1-219ENST00000523427 TRIM16LQ309B1 348 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 SP6Q3SY56 376 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 RNASE11Q8TAA1 199 aaKnown RBP18.58■□□□□ 0.56
PVT1-219ENST00000523427 C1QTNF4Q9BXJ3 329 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 ABCA13Q86UQ4 5058 aa18.58■□□□□ 0.56
PVT1-219ENST00000523427 IGHV3OR16-12A0A075B7B8 117 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 INS-IGF2F8WCM5 200 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 HNRNPCP07910 306 aaKnown RBP eCLIP18.57■□□□□ 0.566e-7■□□□□ 9.6
PVT1-219ENST00000523427 RCVRNP35243 200 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 LGALS9BQ3B8N2 356 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 KCTD21Q4G0X4 260 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 C16orf54Q6UWD8 224 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 ZNF575Q86XF7 245 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 Q8WTZ3 238 aa18.57■□□□□ 0.56
PVT1-219ENST00000523427 TRAV30A0A087WSZ9 112 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 IGKV3-20P01619 116 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 P0C879 139 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 FXYD7P58549 80 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 GLMPQ8WWB7 406 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 KRTAP4-5Q9BYR2 181 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 U3KQE9 123 aa18.56■□□□□ 0.56
PVT1-219ENST00000523427 A0A0G2JRQ6 117 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 C3orf85A0A1B0GTC6 90 aa18.55■□□□□ 0.56
PVT1-219ENST00000523427 FAM90A26D6RGX4 464 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms