RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	FUT6	P51993	359 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	SUMO3	P55854	103 aa	Predicted RBP	3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	PSG4	Q00888	419 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	TLE1	Q04724	770 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	FUT7	Q11130	342 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	GAGE4	Q13068	117 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZNF146	Q15072	292 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	LINC01559	Q495D7	138 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	GLIPR1L1	Q6UWM5	242 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZNF788	Q6ZQV5	615 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZNF295-AS1	Q8N0V1	137 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	SLC25A45	Q8N413	288 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	OR51H1	Q8NH63	302 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	SAP25	Q8TEE9	199 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	CNRIP1	Q96F85	164 aa	Predicted RBP	3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	SPAG8	Q99932	426 aa	Predicted RBP	3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	EVPL	Q92817	2033 aa		3.21	□□□□□ -1.9
FAM49B-225	ENST00000523288	KIR2DS1	A0A191URI9	304 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	C3orf85	A0A1B0GTC6	90 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A10P	A6NDY2	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A18P	A6NE21	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A16P	A6NEW6	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A20P	A6NIJ5	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A8P	A6NJQ4	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A7P	A6NKC0	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A22P	A8MWA6	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A12P	A8MX19	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A5P	A8MXJ8	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A23P	A8MXZ1	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	PLPP3	O14495	311 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	MOS	P00540	346 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A15P	P0C7V4	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A13P	P0C7W8	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A14P	P0C7W9	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A24P	P0C7X0	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	CDA	P32320	146 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	RPL8	P62917	257 aa	Known RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZNF90	Q03938	601 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	KIR2DS1	Q14954	304 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	RTL8B	Q17RB0	113 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	OR2M3	Q8NG83	312 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	GTSF1	Q8WW33	167 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	TM4SF19	Q96DZ7	209 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SPACA5	Q96QH8	159 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SH2D2A	Q9NP31	389 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	TCF20	Q9UGU0	1960 aa	Known RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	LOC107986453	A0A1B0GWG9	222 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	GRIFIN	A4D1Z8	144 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	LINC01546	A6NGU7	62 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	OR4C46	A6NHA9	309 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	CELA3A	P09093	270 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	NHLRC4	P0CG21	123 aa	Predicted RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	CCL3	P10147	92 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	GATA2	P23769	480 aa	Predicted RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	EMD	P50402	254 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SUB1	P53999	127 aa	Known RBP eCLIP	3.2	□□□□□ -1.9	2e-6	■■■■□ 24.6
FAM49B-225	ENST00000523288	KIR3DS1	Q14943	382 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	EFNB3	Q15768	340 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SPRN	Q5BIV9	151 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SAMD5	Q5TGI4	173 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	LYZL2	Q7Z4W2	148 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZPLD1	Q8TCW7	415 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	KBTBD11-OT1	A0A1B0GTJ5	212 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288		A0A1B0GUS0	222 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM90A9P	A6NNJ1	464 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	BMPR1B	O00238	502 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	NKX2-2	O95096	273 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	NXPH3	O95157	252 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	PATE4	P0C8F1	98 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	CA6	P23280	308 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	ID1	P41134	155 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	PHLDA2	Q53GA4	152 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	OR11H6	Q8NGC7	330 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	UBALD1	Q8TB05	177 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	RTN4R	Q9BZR6	473 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	FNDC4	Q9H6D8	234 aa	Predicted RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SMIM9	A6NGZ8	99 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	NDUFS7	O75251	213 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	IGHV3-7	P01780	117 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	SPINK8	P0C7L1	97 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZNF121	P58317	390 aa	Predicted RBP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288		Q6AWC8	147 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	TMEM14EP	Q6UXP3	125 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	OR1F12	Q8NHA8	337 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	RFESD	Q8TAC1	157 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	TAF15	Q92804	592 aa	Known RBP eCLIP	3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	MSRB2	Q9Y3D2	182 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288	MUC6	Q6W4X9	2439 aa		3.2	□□□□□ -1.9
FAM49B-225	ENST00000523288		A0A1W2PPI3	338 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	C11orf94	C9JXX5	98 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	NPIPB11	E5RHQ5	1161 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	GLI4	P10075	376 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	COX5A	P20674	150 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	KIR2DS2	P43631	304 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	ZNRF2	Q8NHG8	242 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	LRRC29	Q8WV35	223 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	LHX4	Q969G2	390 aa		3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	FAM103A1	Q9BTL3	118 aa	Known RBP	3.19	□□□□□ -1.9
FAM49B-225	ENST00000523288	MTCH1	Q9NZJ7	389 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms