RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 TSPAN4O14817 238 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 FCGR3BO75015 233 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 IFNA5P01569 189 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 SFTA3P0C7M3 94 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 IGHV4-30-4P0DP06 118 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 IRF2P14316 349 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 UBE2KP61086 200 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 PEA15Q15121 130 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 HAGHQ16775 308 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 STX12Q86Y82 276 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF439Q8NDP4 499 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 SCGB1C1Q8TD33 95 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 GNPNAT1Q96EK6 184 aaPredicted RBP5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 RSG1Q9BU20 258 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 QTRT1Q9BXR0 403 aaKnown RBP5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 FBXO7Q9Y3I1 522 aa5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
CTNNA1-227ENST00000521387 TRGV10A0A0A0MS01 117 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 TRAV3A0A0B4J244 114 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF729A6NN14 1252 aaPredicted RBP5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 A8MZ25 164 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 UMAD1C9J7I0 102 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 CCL24O00175 119 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 HPRT1P00492 218 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 OR8U8P0C7N1 319 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 RBMY1A1P0DJD3 496 aaKnown RBP5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 NFYBP25208 207 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 RPS16P62249 146 aaKnown RBP5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 SLC38A11Q08AI6 406 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 SPINK9Q5DT21 86 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 AKR1C8PQ5T2L2 129 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 PRAMEF5Q5TYX0 476 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 LGALS9CQ6DKI2 356 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 LINC00336Q6ZUF6 198 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 Q8N1Y9 231 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 SVBPQ8N300 66 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 CLRN3Q8NCR9 226 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 CD300LFQ8TDQ1 290 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 RARRES2Q99969 163 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 FAM110AQ9BQ89 295 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF251Q9BRH9 671 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 PARD6GQ9BYG4 376 aaPredicted RBP5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 VSIRQ9H7M9 311 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 LINC00574Q9H8X3 128 aa5.63□□□□□ -1.51
CTNNA1-227ENST00000521387 TRAV38-1A0A0B4J264 116 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 C15orf62A8K5M9 175 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 CEBPZOSA8MTT3 80 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 RBFOX2O43251 390 aaKnown RBP eCLIP5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 SNAPINO95295 136 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 NDUFB7P17568 137 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 KIR2DS2P43631 304 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 PPT1P50897 306 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 RAB7AP51149 207 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 OR2B8PP59922 312 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 HBG1P69891 147 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 HBG2P69892 147 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 TAGLNQ01995 201 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 LDLRAD2Q5SZI1 272 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 OR8G2PQ6IF36 304 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 SLC25A24Q6NUK1 477 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM88Q6PEY1 159 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 DPPA3Q6W0C5 159 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 SSX9Q7RTT3 188 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 C1orf87Q8N0U7 546 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 VKORC1L1Q8N0U8 176 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 LILRB2Q8N423 598 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF383Q8NA42 475 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 LFNGQ8NES3 379 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 DTD1Q8TEA8 209 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 S1PR3Q99500 378 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 WDR61Q9GZS3 305 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 EIF5A2Q9GZV4 153 aaKnown RBP5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 RAB9BQ9NP90 201 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 RPRMQ9NS64 109 aa5.62□□□□□ -1.51
CTNNA1-227ENST00000521387 SAA2-SAA4A0A096LPE2 208 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 UBE2L5PA0A1B0GUS4 154 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 hADV38S2A0JD32 116 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 RBFOX3A6NFN3 312 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 MARCH11A6NNE9 402 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 FAM90A9PA6NNJ1 464 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 BRI3O95415 125 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SRP19P09132 144 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SAA2P0DJI9 122 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 OR13C7P0DN81 318 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 GP9P14770 177 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 CCL3L1P16619 93 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 ATF4P18848 351 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 GNG10P50151 68 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SPCS3P61009 180 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 MEF2CQ06413 473 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 ICAM4Q14773 271 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 ATP6V1FQ16864 119 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 DEFB136Q30KP8 78 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 AARDQ4LEZ3 155 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 ZNF506Q5JVG8 444 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM200BQ69YZ2 307 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SSX7Q7RTT5 188 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 LHFPL4Q7Z7J7 247 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms