RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 OR7D2Q96RA2 312 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 AIF1LQ9BQI0 150 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 C7orf50Q9BRJ6 194 aaKnown RBP1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 GNB1LQ9BYB4 327 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 PCBD2Q9H0N5 130 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 HDHD2Q9H0R4 259 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 TXNIPQ9H3M7 391 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 PLEKHJ1Q9NW61 149 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 IL20Q9NYY1 176 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 TVP23BQ9NYZ1 205 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 COPZ2Q9P299 210 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 LINC00588Q9Y4M8 146 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 HSPB11Q9Y547 144 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 NUBP2Q9Y5Y2 271 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 SRCAPQ6ZRS2 3230 aa1.76□□□□□ -2.13
HMGN1P28-201ENST00000521340 DIDO1Q9BTC0 2240 aaKnown RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 UTRNP46939 3433 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MED12Q93074 2177 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MED12LQ86YW9 2145 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 TRAV1-2A0A0B4J238 106 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CPSF4LA6NMK7 179 aaKnown RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ZNF729A6NN14 1252 aaPredicted RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 LRRN3E7EW58 273 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 KPNA3O00505 521 aaPredicted RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CDC42EP2O14613 210 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CCL16O15467 120 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 EEF1E1O43324 174 aaKnown RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 NOS1APO75052 506 aaPredicted RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 UBL3O95164 117 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 TCRBP04435 133 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 HMGN1P05114 100 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 UCHL1P09936 223 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SCGB1C2P0DMR2 95 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 IFI30P13284 250 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CTLA4P16410 223 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 UGT2B7P16662 529 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ATF1P18846 271 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CXCL3P19876 107 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CSRP1P21291 193 aaKnown RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 HIST1H1TP22492 207 aaPredicted RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 F8A1P23610 371 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 IFNGR2P38484 337 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ZNF83P51522 516 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MP68P56378 58 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CTBP2P56545 445 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 RPS11P62280 158 aaKnown RBP eCLIP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 FMODQ06828 376 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 BAMBIQ13145 260 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CDK5R1Q15078 307 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MAPK14Q16539 360 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 C9orf64Q5T6V5 341 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 RPL13AP3Q6NVV1 102 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SLC48A1Q6P1K1 146 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 TEX261Q6UWH6 196 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 FAM19A5Q7Z5A7 132 aaPredicted RBP1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SLC51BQ86UW2 128 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 COMMD7Q86VX2 200 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SGPP2Q8IWX5 399 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ACBD7Q8N6N7 88 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ZNF680Q8NEM1 530 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 OR11G2Q8NGC1 345 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 OR52L1Q8NGH7 329 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 OR2T4Q8NH00 348 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 OR5J2Q8NH18 312 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SCGB1C1Q8TD33 95 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MS4A6EQ96DS6 147 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SMIM19Q96E16 107 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 RBP7Q96R05 134 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SEC22CQ9BRL7 303 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MED28Q9H204 178 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ABCG5Q9H222 651 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CMC2Q9NRP2 79 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 MED9Q9NWA0 146 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 GLTPQ9NZD2 209 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 CALML5Q9NZT1 146 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ABRACLQ9P1F3 81 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 COMMD3Q9UBI1 195 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SLC23A2Q9UGH3 650 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SCP2D1Q9UJQ7 156 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 BAIAP2Q9UQB8 552 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 SLC35A3Q9Y2D2 325 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 R4GN34 69 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 U3KQ87 197 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 RTTNQ86VV8 2226 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 FREM1Q5H8C1 2179 aa1.75□□□□□ -2.13
HMGN1P28-201ENST00000521340 ZNF407Q9C0G0 2248 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 CEP290O15078 2479 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 TRAV27A0A087WT01 109 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 TRAPPC13A5PLN9 417 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 NAP1L6A6NFF2 107 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 OR5H14A6NHG9 310 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 RIIAD1A6NNX1 92 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 F5H768 121 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 I3L521 148 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 M0R233 179 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 AIPO00170 330 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 PIN1P1O15428 100 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 DHFRP00374 187 aa1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 CFDP00746 253 aaPredicted RBP1.74□□□□□ -2.13
HMGN1P28-201ENST00000521340 IFNA7P01567 189 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms