RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 DEDDO75618 318 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 IFNA4P05014 189 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 OPRK1P41145 380 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 NPBWR1P48145 328 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 VAMP2P63027 116 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 DEFB136Q30KP8 78 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 CLEC19AQ6UXS0 136 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 LINC00482Q8N8I6 264 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 TMEM116Q8NCL8 245 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 PPP1R1CQ8WVI7 109 aa13.39□□□□□ -0.27
TRAM1-203ENST00000520700 PINX1Q96BK5 328 aaKnown RBP13.39□□□□□ -0.27
TRAM1-203ENST00000520700 BMPR1BO00238 502 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 GGCTO75223 188 aaKnown RBP13.38□□□□□ -0.27
TRAM1-203ENST00000520700 SCAF4O95104 1147 aaKnown RBP13.38□□□□□ -0.27
TRAM1-203ENST00000520700 TRBV12-3P01733 135 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 PF4P02776 101 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 CTSGP08311 255 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 GIPP09681 153 aaPredicted RBP13.38□□□□□ -0.27
TRAM1-203ENST00000520700 KLF5Q13887 457 aaPredicted RBP13.38□□□□□ -0.27
TRAM1-203ENST00000520700 MLANAQ16655 118 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 WDR89Q96FK6 387 aaPredicted RBP13.38□□□□□ -0.27
TRAM1-203ENST00000520700 ZNF436Q9C0F3 470 aaPredicted RBP13.38□□□□□ -0.27
TRAM1-203ENST00000520700 S4R3C0 116 aa13.38□□□□□ -0.27
TRAM1-203ENST00000520700 TRRAPQ9Y4A5 3859 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 IGHV3-21A0A0B4J1V1 117 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 E5RGE8 158 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 H0YIZ8 118 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 TGOLN2O43493 480 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 CLN5O75503 358 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 MPC2O95563 127 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 IGHV3-23P01764 117 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 PET100P0DJ07 73 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 ARL3P36405 182 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 S100A10P60903 97 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 PRSS54Q6PEW0 395 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 DUX3Q96PT4 197 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 RNF126Q9BV68 326 aa13.37□□□□□ -0.27
TRAM1-203ENST00000520700 LYRM2Q9NU23 88 aaPredicted RBP13.37□□□□□ -0.27
TRAM1-203ENST00000520700 TRAV30A0A087WSZ9 112 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 FNDC10F2Z333 226 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 H3BP45 60 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 LYL1P12980 280 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 HOXD3P31249 432 aaPredicted RBP13.36□□□□□ -0.27
TRAM1-203ENST00000520700 GPR183P32249 361 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 P2RY1P47900 373 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 RAP2BP61225 183 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 ACSM6Q6P461 480 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 SLC16A13Q7RTY0 426 aa13.36□□□□□ -0.27
TRAM1-203ENST00000520700 MRPL36Q9P0J6 103 aaKnown RBP13.36□□□□□ -0.27
TRAM1-203ENST00000520700 ADMP35318 185 aa13.35□□□□□ -0.27
TRAM1-203ENST00000520700 RPEL1Q2QD12 228 aa13.35□□□□□ -0.27
TRAM1-203ENST00000520700 Q56UQ5 140 aa13.35□□□□□ -0.27
TRAM1-203ENST00000520700 OR10P1Q8NGE3 313 aa13.35□□□□□ -0.27
TRAM1-203ENST00000520700 DLX4Q92988 240 aaPredicted RBP13.35□□□□□ -0.27
TRAM1-203ENST00000520700 GGACTQ9BVM4 153 aa13.35□□□□□ -0.27
TRAM1-203ENST00000520700 OR2T8A6NH00 312 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 PPP5D1E7EU14 171 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 LGALS9O00182 355 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 NUPL2O15504 423 aaKnown RBP13.34□□□□□ -0.27
TRAM1-203ENST00000520700 GNG7O60262 68 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 SCGB2A1O75556 95 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 IGHV3-48P01763 117 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 SLURP1P55000 103 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 DLK1P80370 383 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 FGL1Q08830 312 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 GAMTQ14353 236 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 C1QL4Q86Z23 238 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 TMEM252Q8N6L7 170 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 DCUN1D4Q92564 292 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 CHRDL1Q9BU40 450 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 OR5AC2Q9NZP5 309 aa13.34□□□□□ -0.27
TRAM1-203ENST00000520700 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
TRAM1-203ENST00000520700 FAM24AA6NFZ4 105 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 OR2C1O95371 312 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 METTL15P1P0C7V9 234 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 SULT1A1P50225 295 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 BCAP31P51572 246 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 CAV2P51636 162 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 RND2P52198 227 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 RELQ04864 619 aaPredicted RBP13.33□□□□□ -0.28
TRAM1-203ENST00000520700 LRRC37A5PQ49AS3 106 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 FAM106AQ4KMX7 169 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 REC114Q7Z4M0 266 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 UBAC2Q8NBM4 344 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 CHAC2Q8WUX2 184 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 NPIPB3Q92617 1050 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 SLC35E1Q96K37 410 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 MCRIP2Q9BUT9 160 aaKnown RBP13.33□□□□□ -0.28
TRAM1-203ENST00000520700 SLC25A31Q9H0C2 315 aa13.33□□□□□ -0.28
TRAM1-203ENST00000520700 PKD1L1Q8TDX9 2849 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 NDUFA4O00483 81 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 OVOL1O14753 267 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 IGKV1-17P01599 117 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 IGLC1P0CG04 106 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
TRAM1-203ENST00000520700 ARL16Q0P5N6 197 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 HAPLN4Q86UW8 402 aa13.32□□□□□ -0.28
TRAM1-203ENST00000520700 OR1S2Q8NGQ3 325 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms