RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 SSBP3Q9BWW4 388 aaPredicted RBP8.27□□□□□ -1.09
MCF2-209ENST00000520602 PARD6GQ9BYG4 376 aaPredicted RBP8.27□□□□□ -1.09
MCF2-209ENST00000520602 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 SHISA9B4DS77 424 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 K7EQM0 130 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 PRB4P10163 310 aaPredicted RBP8.26□□□□□ -1.09
MCF2-209ENST00000520602 ATP5IP56385 69 aaPredicted RBP8.26□□□□□ -1.09
MCF2-209ENST00000520602 PPP1R27Q86WC6 154 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 CACNG8Q8WXS5 425 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 TIMM23O14925 209 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 GFI1BQ5VTD9 330 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 LEMD1Q68G75 181 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 SRD5A3Q9H8P0 318 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 DSPP15924 2871 aaKnown RBP8.26□□□□□ -1.09
MCF2-209ENST00000520602 IGHV3OR16-10A0A075B7F0 116 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 ELOA3CA0A087WX78 387 aaPredicted RBP8.26□□□□□ -1.09
MCF2-209ENST00000520602 CRISP2P16562 243 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 SRP14P37108 136 aaKnown RBP8.26□□□□□ -1.09
MCF2-209ENST00000520602 KLRD1Q13241 179 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 ECSCRQ19T08 205 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 OR4F17Q8NGA8 305 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 HIGD1AQ9Y241 93 aa8.26□□□□□ -1.09
MCF2-209ENST00000520602 C5orf52A6NGY3 159 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 RNASE2P10153 161 aaKnown RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 SFTPCP11686 197 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 FOLR2P14207 255 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 HIST1H1BP16401 226 aaKnown RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 C1orf229Q6ZS94 237 aaPredicted RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 RBM14Q96PK6 669 aaKnown RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 GSX1Q9H4S2 264 aaPredicted RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 CBLN4Q9NTU7 201 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 PAX5Q02548 391 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 TMEM155Q4W5P6 130 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 C2orf83Q53S99 150 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 IBA57Q5T440 356 aaKnown RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 SRSF12Q8WXF0 261 aaKnown RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 BORCS7Q96B45 105 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 NCOR1P1Q9H4R4 102 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 TPSG1Q9NRR2 321 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 THYN1Q9P016 225 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 YTHDF2Q9Y5A9 579 aaKnown RBP8.25□□□□□ -1.09
MCF2-209ENST00000520602 FRYQ5TBA9 3013 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 GRIFINA4D1Z8 144 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 CBLN1P23435 193 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 CNTFRP26992 372 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 CSN1S1P47710 185 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 KIAA1644Q3SXP7 199 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 CCDC144NLQ6NUI1 221 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 STXBP6Q8NFX7 210 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 TMEM167AQ8TBQ9 72 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 MUC3AQ02505 3323 aa8.25□□□□□ -1.09
MCF2-209ENST00000520602 IGHV1-3A0A0C4DH29 117 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 PMS2P5A8MQ11 134 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 AREGP15514 252 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 PMCHP20382 165 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 C19orf35Q6ZS72 473 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 LINC01551Q86U37 167 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
MCF2-209ENST00000520602 CORTO00230 105 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 CT45A10P0DMU9 189 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 BRS3P32247 399 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 TMEM177Q53S58 311 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 ST6GALNAC3Q8NDV1 305 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 MS4A10Q96PG2 267 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 C19orf24Q9BVV8 132 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 WNT10AQ9GZT5 417 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 IGHV3OR16-8A0A075B7F1 116 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 IGHV3-23P01764 117 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 HOXA5P20719 270 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 GPX4P36969 197 aaPredicted RBP8.24□□□□□ -1.09
MCF2-209ENST00000520602 RPL11P62913 178 aaKnown RBP8.24□□□□□ -1.09
MCF2-209ENST00000520602 PRSS8Q16651 343 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 TCF23Q7RTU1 214 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 C1QL4Q86Z23 238 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 OR5AN1Q8NGI8 311 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 IGFBPL1Q8WX77 278 aa8.24□□□□□ -1.09
MCF2-209ENST00000520602 MFAP2P55001 183 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 KRTDAPP60985 99 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 ZNF833PQ6ZTB9 187 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 KIR3DL3Q8N743 410 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 SIGLECL1Q8N7X8 197 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 OR1P1Q8NH06 330 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 NEU4Q8WWR8 484 aaPredicted RBP8.23□□□□□ -1.09
MCF2-209ENST00000520602 DDB2Q92466 427 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 SCRT1Q9BWW7 348 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 RNASE7Q9H1E1 156 aaKnown RBP8.23□□□□□ -1.09
MCF2-209ENST00000520602 ZNF292O60281 2723 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 NBEAP1P0C6P0 100 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 P0C879 139 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 FCGR2BP31994 310 aaPredicted RBP8.23□□□□□ -1.09
MCF2-209ENST00000520602 KLF17Q5JT82 389 aaPredicted RBP8.23□□□□□ -1.09
MCF2-209ENST00000520602 OR4A5Q8NH83 315 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 MRPL32Q9BYC8 188 aaKnown RBP8.23□□□□□ -1.09
MCF2-209ENST00000520602 C1RLQ9NZP8 487 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 A0A1W2PPI3 338 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 BUB1B-PAK6H3BSN5 160 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 CHEK1O14757 476 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 ZNF253O75346 499 aa8.23□□□□□ -1.09
MCF2-209ENST00000520602 HCFC1P51610 2035 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms