RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 CCDC88AQ3V6T2 1871 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 IGKV2-28A0A075B6P5 120 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 TRAV4A0A0B4J268 109 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 A0A1W2PRE2 83 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 RIIAD1A6NNX1 92 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 H3BT86 120 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 IGKV2D-28P01615 120 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 CSN2P05814 226 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 DEFA4P12838 97 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 ZNF80P51504 273 aaPredicted RBP2.12□□□□□ -2.07
SREK1-208ENST00000520580 RBM11P57052 281 aaKnown RBP2.12□□□□□ -2.07
SREK1-208ENST00000520580 FXYD7P58549 80 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 SAMD13Q5VXD3 122 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 HMGN2P46Q86SG4 172 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 CLVS1Q8IUQ0 354 aaPredicted RBP2.12□□□□□ -2.07
SREK1-208ENST00000520580 SH3BGRL3Q9H299 93 aa2.12□□□□□ -2.07
SREK1-208ENST00000520580 RBM7Q9Y580 266 aaKnown RBP2.12□□□□□ -2.07
SREK1-208ENST00000520580 TNS1Q9HBL0 1735 aaKnown RBP2.11□□□□□ -2.07
SREK1-208ENST00000520580 SEC16AO15027 2179 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 UGGT2Q9NYU1 1516 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 SSH2Q76I76 1423 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 VCANP13611 3396 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 UNC80Q8N2C7 3258 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 SHANK1Q9Y566 2161 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 SIPA1L1O43166 1804 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 KIF13BQ9NQT8 1826 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 NLRP1Q9C000 1473 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 ARHGAP35Q9NRY4 1499 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 MLH3Q9UHC1 1453 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 ZNF106Q9H2Y7 1883 aaKnown RBP2.11□□□□□ -2.07
SREK1-208ENST00000520580 UBFD1O14562 309 aaKnown RBP2.11□□□□□ -2.07
SREK1-208ENST00000520580 BLVRBP30043 206 aaPredicted RBP2.11□□□□□ -2.07
SREK1-208ENST00000520580 EIF2B2P49770 351 aaKnown RBP2.11□□□□□ -2.07
SREK1-208ENST00000520580 RPS11P62280 158 aaKnown RBP eCLIP2.11□□□□□ -2.07
SREK1-208ENST00000520580 ZNF117Q03924 483 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 PHF13Q86YI8 300 aaPredicted RBP2.11□□□□□ -2.07
SREK1-208ENST00000520580 RPRMLQ8N4K4 120 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 PCTPQ9UKL6 214 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 HEY1Q9Y5J3 304 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 CASZ1Q86V15 1759 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 ADGRB2O60241 1585 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 SLIT2O94813 1529 aa2.11□□□□□ -2.07
SREK1-208ENST00000520580 J3QRK9 145 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 TP53I11O14683 189 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 IFI30P13284 250 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 GABRA4P48169 554 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 CDC42P60953 191 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 CCL20P78556 96 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 RPL18Q07020 188 aaKnown RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 TMEM78Q5T7P6 136 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 RPL22L1Q6P5R6 122 aaKnown RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 CLDND2Q8NHS1 167 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 SMCR5Q8TEV8 140 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 ZNF2Q9BSG1 426 aaPredicted RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 C20orf27Q9GZN8 174 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 PZPP20742 1482 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 MAST2Q6P0Q8 1798 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 RREB1Q92766 1687 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 GRIFINA4D1Z8 144 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 FABP5P3A8MUU1 101 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 ORC5O43913 435 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 GZMBP10144 247 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 RPL28P46779 137 aaKnown RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 LTC4SQ16873 150 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 PYDC2Q56P42 97 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 TMEM128Q5BJH2 165 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 LYRM7Q5U5X0 104 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 HEATR5AQ86XA9 2040 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 C12orf29Q8N999 325 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 MBD3L1Q8WWY6 194 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 IMMP2LQ96T52 175 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 SERPINI1Q99574 410 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 EFCAB11Q9BUY7 163 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 BAHCC1Q9P281 2608 aa2.1□□□□□ -2.07
SREK1-208ENST00000520580 NKTRP30414 1462 aaKnown RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.1□□□□□ -2.07
SREK1-208ENST00000520580 A0A1B0GU33 70 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 C11orf86A6NJI1 115 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 BUB1B-PAK6H3BSN5 160 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 ZNF73O43830 326 aaPredicted RBP2.09□□□□□ -2.07
SREK1-208ENST00000520580 NDUFB2O95178 105 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 NPYP01303 97 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 CASP1P29466 404 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 ALDH3A1P30838 453 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 EMP1P54849 157 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 AMMECR1LQ6DCA0 310 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 OR51T1Q8NGJ9 327 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 CHST6Q9GZX3 395 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 MROH1Q8NDA8 1641 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 TRIOBPQ9H2D6 2365 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 SAMD9LQ8IVG5 1584 aa2.09□□□□□ -2.07
SREK1-208ENST00000520580 CICQ96RK0 1608 aaPredicted RBP2.09□□□□□ -2.07
SREK1-208ENST00000520580 IGLV2-18A0A075B6J9 118 aa2.09□□□□□ -2.08
SREK1-208ENST00000520580 A0A1B0GW54 56 aa2.09□□□□□ -2.08
SREK1-208ENST00000520580 AIPO00170 330 aa2.09□□□□□ -2.08
SREK1-208ENST00000520580 ARPC5O15511 151 aa2.09□□□□□ -2.08
SREK1-208ENST00000520580 CYB5BO43169 146 aa2.09□□□□□ -2.08
SREK1-208ENST00000520580 IFNA7P01567 189 aa2.09□□□□□ -2.08
SREK1-208ENST00000520580 PPBPP02775 128 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms