RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 IGKV1-33P01594 117 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 AMBPP02760 352 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SCTP09683 121 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 METTL15P1P0C7V9 234 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SAA2P0DJI9 122 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 GZMBP10144 247 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 ATP6V0CP27449 155 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 TNFRSF9Q07011 255 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 BAXQ07812 192 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 GAGE1Q13065 139 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 GNMTQ14749 295 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 LY6EQ16553 131 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 CT45A1Q5HYN5 189 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 HCP5Q6MZN7 132 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 LHFPL4Q7Z7J7 247 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 CENPVQ7Z7K6 275 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 H1FOOQ8IZA3 346 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 BCL6BQ8N143 479 aaPredicted RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 ZNF664Q8N3J9 261 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 OR2C3Q8N628 320 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 DRAM1Q8N682 238 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 OR1P1Q8NH06 330 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 CT45A3Q8NHU0 189 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 P2RX4Q99571 388 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SPIN2AQ99865 258 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SPIN2BQ9BPZ2 258 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 SLC35D1Q9NTN3 355 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 CBY1Q9Y3M2 126 aa4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 FN1P02751 2386 aaKnown RBP4.53□□□□□ -1.68
CTNNA1-220ENST00000520260 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 TRAV39A0A0B4J263 110 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 MDFIC2A0A1B0GVS7 189 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 A0A1W2PPI3 338 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 IGSF23A1L1A6 192 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 MARCH11A6NNE9 402 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 PPP5D1E7EU14 171 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 LY6LH3BQJ8 138 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 M0R143 59 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 MPPED1O15442 326 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 RBFOX2O43251 390 aaKnown RBP eCLIP4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 FCN3O75636 299 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 TUSC2O75896 110 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 CNIH1O95406 144 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 SERPINE2P07093 398 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 UCP1P25874 307 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 PIGPP57054 158 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 TAS2R30P59541 319 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 RPS16P62249 146 aaKnown RBP4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 HERPUD1Q15011 391 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 FAM90A2PQ658T7 463 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 LYZL2Q7Z4W2 148 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 C5orf24Q7Z6I8 188 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 CYB561D1Q8N8Q1 229 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF439Q8NDP4 499 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 OR4F17Q8NGA8 305 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 OR4X1Q8NH49 305 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 OR4A5Q8NH83 315 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 MBD3L1Q8WWY6 194 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 LEAP2Q969E1 77 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 MOB3AQ96BX8 217 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 HARBI1Q96MB7 349 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF48Q96MX3 618 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 DUX5Q96PT3 197 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 OR4F4Q96R69 305 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 AGMATQ9BSE5 352 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 HDHD3Q9BSH5 251 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 IFI27L2Q9H2X8 130 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 SDF2L1Q9HCN8 221 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 LYRM2Q9NU23 88 aaPredicted RBP4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 FKBP11Q9NYL4 201 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 ZNF580Q9UK33 172 aa4.52□□□□□ -1.69
CTNNA1-220ENST00000520260 KIR2DL5BA0A0G2JN68 375 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 KIR2DL5BA0A0G2JPC4 375 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 FAM24AA6NFZ4 105 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 FAM90A9PA6NNJ1 464 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 EREGO14944 169 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 MMP23AO75900 390 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 IGHV3-7P01780 117 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 HLA-DRB1P01911 266 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 TYMSP04818 313 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 PFN1P07737 140 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 LINC00614P0C842 121 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 REG1BP48304 166 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 FXYD4P59646 89 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 ERVFC1-1P60608 527 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 RPL23AP62750 156 aaKnown RBP4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 EBI3Q14213 229 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 USF2Q15853 346 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 IQCJQ1A5X6 159 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 ANKRD39Q53RE8 183 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 CXorf66Q5JRM2 361 aaPredicted RBP4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 C1orf194Q5T5A4 169 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 TEX38Q6PEX7 206 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 PRIMA1Q86XR5 153 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 TMEM219Q86XT9 240 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 MMD2Q8IY49 270 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 KIR2DL5AQ8N109 375 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 TMEM252Q8N6L7 170 aa4.51□□□□□ -1.69
CTNNA1-220ENST00000520260 TEX45Q8NA69 505 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms