RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	GRPEL2	Q8TAA5	225 aa		5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	ARPC1A	Q92747	370 aa		5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	BORCS5	Q969J3	196 aa		5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	SLIRP	Q9GZT3	109 aa	Known RBP	5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	FBXO7	Q9Y3I1	522 aa		5.22	□□□□□ -1.57
SDCBP-208	ENST00000520228	WNK1	Q9H4A3	2382 aa		5.21	□□□□□ -1.57
SDCBP-208	ENST00000520228	IGLV4-3	A0A075B6K6	122 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	ARPC1B	O15143	372 aa	Known RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	CREBL2	O60519	120 aa	Predicted RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	IFNA6	P05013	189 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	PSMB8	P28062	276 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	CD40LG	P29965	261 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	SLC6A1	P30531	599 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	GNRHR	P30968	328 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	KIR2DS2	P43631	304 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	KRTAP10-7	P60409	375 aa	Predicted RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	CATR1	Q13166	79 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	PRSS8	Q16651	343 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	AKIRIN2	Q53H80	203 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	ACTBL2	Q562R1	376 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	VAX1	Q5SQQ9	334 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	AADACL3	Q5VUY0	350 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	LPCAT3	Q6P1A2	487 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	UNQ5815/PRO19632	Q6UWF5	114 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	IDO2	Q6ZQW0	420 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	ZNF818P	Q6ZRF7	136 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	CMTM1	Q8IZ96	169 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	SPAG16	Q8N0X2	631 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	TCTEX1D1	Q8N7M0	179 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	KLHL30-AS1	Q8NEE0	82 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	LFNG	Q8NES3	379 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	MCFD2	Q8NI22	146 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	DIRAS2	Q96HU8	199 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	FAM103A1	Q9BTL3	118 aa	Known RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	GPN1	Q9HCN4	374 aa	Predicted RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	MTFP1	Q9UDX5	166 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	RSL24D1	Q9UHA3	163 aa	Known RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	RABL2B	Q9UNT1	228 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	FOXA2	Q9Y261	457 aa	Predicted RBP	5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	NUBP2	Q9Y5Y2	271 aa		5.21	□□□□□ -1.58
SDCBP-208	ENST00000520228	GABARAP	H6UMI1	98 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	ZNF701	M0R085	212 aa	Predicted RBP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	GPR31	O00270	319 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	RBFOX2	O43251	390 aa	Known RBP eCLIP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	SOX15	O60248	233 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	RAMP3	O60896	148 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	PGLYRP1	O75594	196 aa	Predicted RBP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	OR2A4	O95047	310 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	HRAS	P01112	189 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	CD3D	P04234	171 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	SAA1	P0DJI8	122 aa	Predicted RBP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	TBP	P20226	339 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	S100G	P29377	79 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	MYCNOS	P40205	109 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	RAB9A	P51151	201 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	MRPS10	P82664	201 aa	Known RBP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	IL18	Q14116	193 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	ZNF674	Q2M3X9	581 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	RNASE10	Q5GAN6	216 aa	Known RBP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	PYHIN1	Q6K0P9	492 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	VKORC1L1	Q8N0U8	176 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	WFDC9	Q8NEX5	89 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	OR51H1	Q8NH63	302 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	VSTM2A	Q8TAG5	236 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	CD300LF	Q8TDQ1	290 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	OR2A7	Q96R45	310 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	ZNF430	Q9H8G1	570 aa	Predicted RBP	5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	ZNF355P	Q9NSJ1	428 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	VSIG4	Q9Y279	399 aa		5.2	□□□□□ -1.58
SDCBP-208	ENST00000520228	FABP12	A6NFH5	140 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	RAB3D	O95716	219 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	HPRT1	P00492	218 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	NQO2	P16083	231 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	FCGR2B	P31994	310 aa	Predicted RBP	5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	TAS2R19	P59542	299 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	DEFA6	Q01524	100 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SSBP1	Q04837	148 aa	Known RBP	5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	TNXA	Q16473	311 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	STEAP1B	Q6NZ63	245 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SSX9	Q7RTT3	188 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SLC38A6	Q8IZM9	456 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	ARRDC1	Q8N5I2	433 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	ZNF491	Q8N8L2	437 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	TMEM229B	Q8NBD8	167 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	OR5T1	Q8NG75	326 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	MYOZ3	Q8TDC0	251 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	CASTOR1	Q8WTX7	329 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SMIM4	Q8WVI0	70 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	C4orf3	Q8WVX3	66 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SRSF12	Q8WXF0	261 aa	Known RBP	5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	DGCR14	Q96DF8	476 aa	Known RBP	5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	UBE2E2	Q96LR5	201 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	OR5B12	Q96R08	314 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	P2RX4	Q99571	388 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	PHB2	Q99623	299 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SPIN2A	Q99865	258 aa		5.19	□□□□□ -1.58
SDCBP-208	ENST00000520228	SPIN2B	Q9BPZ2	258 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms