RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 BUB1B-PAK6H3BSN5 160 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 CYBAP13498 195 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 SERPINB1P30740 379 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 PSMD8P48556 350 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 EIF2B2P49770 351 aaKnown RBP2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 AQP4P55087 323 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 CDC42P60953 191 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 SMCO1Q147U7 214 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 MIR17HGQ75NE6 70 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 TMED4Q7Z7H5 227 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 DHFR2Q86XF0 187 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 C12orf29Q8N999 325 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 PHB2Q99623 299 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 SLC39A9Q9NUM3 307 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 TVP23BQ9NYZ1 205 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 FAM32AQ9Y421 112 aaKnown RBP2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 PTPRSQ13332 1948 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 EIF3AQ14152 1382 aaKnown RBP2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 WDR7Q9Y4E6 1490 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 SIGLEC16A6NMB1 481 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 MIF4GDA9UHW6 222 aaKnown RBP2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 J3QRK9 145 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 OVOL1O14753 267 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 ZNF737O75373 536 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 OR2J2O76002 312 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 IGKV1-16P04430 117 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 G0S2P27469 103 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 TMEM155Q4W5P6 130 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 DHRS4L2Q6PKH6 230 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 Q6Q795 121 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 TMEM35BQ8NCS4 154 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 OR8B3Q8NGG8 313 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 ENY2Q9NPA8 101 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 ARMC1Q9NVT9 282 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 CKLFQ9UBR5 152 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 BAIAP2Q9UQB8 552 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 TOPBP1Q92547 1522 aa2.17□□□□□ -2.06
HMGB1P46-201ENST00000520062 ERCC6Q03468 1493 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 F8W036 122 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 M0QZK8 103 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 NDUFA2O43678 99 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 CLPSP04118 112 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 GPX1P07203 203 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 TFAMQ00059 246 aaKnown RBP2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 TAF1AQ15573 450 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 BRMS1LQ5PSV4 323 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 DEFB128Q7Z7B8 93 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 PHF13Q86YI8 300 aaPredicted RBP2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 BPIFA4PQ86YQ2 179 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 DDA1Q9BW61 102 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 FAM107BQ9H098 131 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 OPTCQ9UBM4 332 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 GINS2Q9Y248 185 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 CYSLTR1Q9Y271 337 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 MYH3P11055 1940 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 SMARCA4P51532 1647 aa2.16□□□□□ -2.06
HMGB1P46-201ENST00000520062 MAST2Q6P0Q8 1798 aa2.15□□□□□ -2.06
HMGB1P46-201ENST00000520062 A0A1B0GV72 72 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 J3QKU1 62 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 SDCBPO00560 298 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 ORC5O43913 435 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 HTR1AP08908 422 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 S100A4P26447 101 aaKnown RBP2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 YPEL3P61236 119 aaPredicted RBP2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 POU6F1Q14863 301 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 HACD4Q5VWC8 232 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 S100A7AQ86SG5 101 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 TRAPPC6BQ86SZ2 158 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 HIST3H2BBQ8N257 126 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 C9orf163Q8N9P6 203 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 NEK7Q8TDX7 302 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 TCEAL4Q96EI5 215 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 CST9LQ9H4G1 147 aa2.15□□□□□ -2.07
HMGB1P46-201ENST00000520062 ICE1Q9Y2F5 2266 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 A0A0D9SG52 128 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 IBA57-AS1B1ANH7 110 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 TCL1BO95988 128 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 COX6A1P12074 109 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 CASP1P29466 404 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 ERP29P30040 261 aaKnown RBP2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 SRP9P49458 86 aaKnown RBP2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 HSPE1P61604 102 aaKnown RBP2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 KRR1Q13601 381 aaKnown RBP2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 ZNF345Q14585 488 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 TRIQKQ629K1 86 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 Q6ZRN7 208 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 C7orf65Q6ZTY9 151 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 CLVS1Q8IUQ0 354 aaPredicted RBP2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 C10orf126Q8N4M7 172 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 SLC25A40Q8TBP6 338 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 DNAJC9Q8WXX5 260 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 MAFIPQ8WZ33 124 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 BORCS5Q969J3 196 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 GPR146Q96CH1 333 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 GINS4Q9BRT9 223 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 TRABDQ9H4I3 376 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 SPANXA1Q9NS26 97 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 GID8Q9NWU2 228 aa2.14□□□□□ -2.07
HMGB1P46-201ENST00000520062 LHFPL6Q9Y693 200 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms