RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 STC1P52823 247 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 RWDD2BP57060 319 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 LINC00313P59037 77 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 EMX1Q04741 257 aaPredicted RBP0.86□□□□□ -2.27
SKP1-205ENST00000519054 PMS2P3Q13401 168 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 USF2Q15853 346 aaPredicted RBP0.86□□□□□ -2.27
SKP1-205ENST00000519054 CENPWQ5EE01 88 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.86□□□□□ -2.27
SKP1-205ENST00000519054 SDIM1Q6ZPB5 146 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 BOD1L2Q8IYS8 172 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 TMEM75Q8N9X5 138 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 OR4P4Q8NGL7 312 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 DTD1Q8TEA8 209 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 GALMQ96C23 342 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 GNB1LQ9BYB4 327 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 MRPL32Q9BYC8 188 aaKnown RBP0.86□□□□□ -2.27
SKP1-205ENST00000519054 GTSF1LQ9H1H1 148 aa0.86□□□□□ -2.27
SKP1-205ENST00000519054 MRPS16Q9Y3D3 137 aaKnown RBP0.86□□□□□ -2.27
SKP1-205ENST00000519054 F5H5K5 113 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 H3BSA7 217 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 M0QX08 132 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 PHYHO14832 338 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 CYTH3O43739 400 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 NEMFO60524 1076 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 CDK14O94921 469 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 ASS1P00966 412 aaKnown RBP0.85□□□□□ -2.27
SKP1-205ENST00000519054 SERPINA7P05543 415 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 OR4A8P0C604 315 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 RD3LP0DJH9 198 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 KCNE1P15382 129 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 ATF1P18846 271 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 GABRA3P34903 492 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 OPRM1P35372 400 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 ACTR1BP42025 376 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 PSMB3P49720 205 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 DLX6P56179 175 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 RAB8AP61006 207 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 FGF12P61328 243 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 GTF2BQ00403 316 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 ZNF117Q03924 483 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 C4orf26Q17RF5 130 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 TRMT12Q53H54 448 aaKnown RBP0.85□□□□□ -2.27
SKP1-205ENST00000519054 MESTQ5EB52 335 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 CLEC6AQ6EIG7 209 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 PDZD9Q8IXQ8 264 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 BLIDQ8IZY5 108 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 OR4X1Q8NH49 305 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 TAMM41Q96BW9 452 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 UGT2B28Q9BY64 529 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 C11orf1Q9H5F2 150 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 WASHC3Q9Y3C0 194 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 CHD5Q8TDI0 1954 aa0.85□□□□□ -2.27
SKP1-205ENST00000519054 GOLGA8RI6L899 631 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 TOX3O15405 576 aaPredicted RBP0.84□□□□□ -2.27
SKP1-205ENST00000519054 ADAP1O75689 374 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 COX6A1P12074 109 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 SPRR2EP22531 72 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 GADD45AP24522 165 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 SPRR2BP35325 72 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 SPRR2AP35326 72 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 CD79BP40259 229 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 DAPP51397 102 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 DCDP81605 110 aaKnown RBP0.84□□□□□ -2.27
SKP1-205ENST00000519054 DEFB112Q30KQ8 113 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 MRPL51Q4U2R6 128 aaKnown RBP0.84□□□□□ -2.27
SKP1-205ENST00000519054 SPATA31B1PQ5VZV4 182 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 Q6ZRN7 208 aaPredicted RBP0.84□□□□□ -2.27
SKP1-205ENST00000519054 CCDC121Q6ZUS5 278 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 RIBC1Q8N443 379 aaPredicted RBP0.84□□□□□ -2.27
SKP1-205ENST00000519054 TEX29Q8N6K0 151 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 OR5K1Q8NHB7 308 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 CLDND2Q8NHS1 167 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 TNFAIP8L1Q8WVP5 186 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 TBX5Q99593 518 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 GPR22Q99680 433 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 MED10Q9BTT4 135 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 SPACA1Q9HBV2 294 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 C1orf109Q9NX04 203 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 CHMP5Q9NZZ3 219 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 COMMD9Q9P000 198 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 TMEM216Q9P0N5 145 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 CD300AQ9UGN4 299 aa0.84□□□□□ -2.27
SKP1-205ENST00000519054 IGLV3-9A0A075B6K5 115 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 CXorf51AA0A1B0GTR3 108 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 LINC00854A0A1B0GVQ3 168 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 TMEM213A2RRL7 107 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 B4DEV8 164 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 M0QYV0 167 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 TGOLN2O43493 480 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 SOD1P00441 154 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 IGLV3-27P01718 113 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 FBP1P09467 338 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 NQO1P15559 274 aaKnown RBP0.83□□□□□ -2.28
SKP1-205ENST00000519054 CD36P16671 472 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 CDK2P24941 298 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 PSMA1P25786 263 aaKnown RBP0.83□□□□□ -2.28
SKP1-205ENST00000519054 LPAR6P43657 344 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 SLCO1A2P46721 670 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 TSPEAR-AS2P59090 65 aa0.83□□□□□ -2.28
SKP1-205ENST00000519054 GABARAPL2P60520 117 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms