RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 GAPTQ8N292 157 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 TMEM217Q8N7C4 229 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 TCTEX1D1Q8N7M0 179 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-207ENST00000518716 ZNF383Q8NA42 475 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 OR10AC1Q8NH08 325 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 ORAOV1Q8WV07 137 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 GGHQ92820 318 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 RPUSD4Q96CM3 377 aaKnown RBP4.5□□□□□ -1.69
PABPC1-207ENST00000518716 YIPF6Q96EC8 236 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 CXorf58Q96LI9 332 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 IL4I1Q96RQ9 567 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 SULT4A1Q9BR01 284 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 OVOL2Q9BRP0 275 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 DPCDQ9BVM2 203 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-207ENST00000518716 CTDSP1Q9GZU7 261 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 TUBA4BQ9H853 241 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 PARP11Q9NR21 331 aa4.5□□□□□ -1.69
PABPC1-207ENST00000518716 RBM7Q9Y580 266 aaKnown RBP4.5□□□□□ -1.69
PABPC1-207ENST00000518716 A0A1B0GVY2 172 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 NUPR2A6NF83 97 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 CGB1A6NKQ9 187 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 SDCBPO00560 298 aaPredicted RBP4.49□□□□□ -1.69
PABPC1-207ENST00000518716 FCN1O00602 326 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 HIST1H1EP10412 219 aaKnown RBP4.49□□□□□ -1.69
PABPC1-207ENST00000518716 PSMA1P25786 263 aaKnown RBP4.49□□□□□ -1.69
PABPC1-207ENST00000518716 IL3RAP26951 378 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 CRISP1P54107 249 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 KISS1Q15726 138 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 PIGYQ3MUY2 71 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 NHLRC3Q5JS37 347 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 TMEM244Q5VVB8 128 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 AWAT2Q6E213 333 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 C22orf42Q6IC83 251 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 SUMF2Q8NBJ7 301 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 OR51A4Q8NGJ6 313 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 OR6F1Q8NGZ6 308 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 UBALD1Q8TB05 177 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 ARL11Q969Q4 196 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 SGK494Q96LW2 274 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 CNBD2Q96M20 576 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 ARL6Q9H0F7 186 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 CST11Q9H112 138 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 PLEKHA3Q9HB20 300 aa4.49□□□□□ -1.69
PABPC1-207ENST00000518716 PAK1IP1Q9NWT1 392 aaPredicted RBP4.49□□□□□ -1.69
PABPC1-207ENST00000518716 IGHV3-43A0A0B4J1X8 118 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 RPS10-NUDT3A0A1W2PQS6 291 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 OR5H14A6NHG9 310 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 OR4C45A6NMZ5 311 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 J3QRE1 110 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 M0R129 80 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 AIREO43918 545 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 CNIH1O95406 144 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 TFAP2AP05549 437 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 CD7P09564 240 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 GIPP09681 153 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-207ENST00000518716 IGHV3-43DP0DP04 118 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 TMEM225BP0DP42 221 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 EPHA2P29317 976 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 SULT1A1P50225 295 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 SULT1A2P50226 295 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 RORCP51449 518 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 DEFA1P59665 94 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 DEFA3P59666 94 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 RRAS2P62070 204 aaPredicted RBP4.48□□□□□ -1.69
PABPC1-207ENST00000518716 ZNF85Q03923 595 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 CD300CQ08708 224 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 TPBGQ13641 420 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 PMVKQ15126 192 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 ECSCRQ19T08 205 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 C12orf73Q69YU5 71 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 TEX261Q6UWH6 196 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 ZNF497Q6ZNH5 498 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 ZNF833PQ6ZTB9 187 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 SLC16A13Q7RTY0 426 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 GTSCR1Q86UQ5 136 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 BAP18Q8IXM2 172 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 DEFB107AQ8IZN7 70 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 TCTE3Q8IZS6 198 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 PARP16Q8N5Y8 322 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 DEFB125Q8N687 156 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 OR2K2Q8NGT1 345 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 OR10R2Q8NGX6 335 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 OR5B3Q8NH48 314 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 OR52E5Q8NH55 327 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 MRPL20Q9BYC9 149 aaKnown RBP4.48□□□□□ -1.69
PABPC1-207ENST00000518716 WFDC10AQ9H1F0 79 aa4.48□□□□□ -1.69
PABPC1-207ENST00000518716 TMEM30CPA0ZSE6 113 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 MSGN1A6NI15 193 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 C1orf196B1AJZ1 125 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 F6UZH7 168 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 RRHO14718 337 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 FKBP6O75344 327 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 TRBV12-3P01733 135 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 NPSP0C0P6 89 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 S100A2P29034 98 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 DAPP51397 102 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 SYNJ2BPP57105 145 aa4.47□□□□□ -1.69
PABPC1-207ENST00000518716 TPPP2P59282 170 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms