RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 MT-CO2P00403 227 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 PRH1P02810 166 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 TRGV3P03979 118 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 METTL15P1P0C7V9 234 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 PF4V1P10720 104 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 CDX1P47902 265 aaPredicted RBP8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 HBG1P69891 147 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 HBG2P69892 147 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 DLK1P80370 383 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 RUNX1Q01196 453 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 EWSR1Q01844 656 aaKnown RBP eCLIP8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 ATP5G2Q06055 141 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 ZNF345Q14585 488 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 ATP6V1FQ16864 119 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 C15orf32Q32M92 178 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 KRTAP21-3Q3LHN1 58 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 AWAT1Q58HT5 328 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 ACOT7LQ6ZUV0 252 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 HAPLN4Q86UW8 402 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 INO80EQ8NBZ0 244 aaPredicted RBP8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 TMEM116Q8NCL8 245 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 OR10P1Q8NGE3 313 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 ZNF355PQ9NSJ1 428 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 HSPB11Q9Y547 144 aa8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 FBN1P35555 2871 aaKnown RBP8.88□□□□□ -0.99
ARFGEF1-202ENST00000517955 FXYD6-FXYD2A0A087WZ82 144 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 RNF222A6NCQ9 220 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 SMLR1H3BR10 107 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 PFDN1O60925 122 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 RPLP1P05386 114 aaKnown RBP8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 NUP62P37198 522 aaPredicted RBP8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 OPRK1P41145 380 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 TPPP2P59282 170 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 CD300CQ08708 224 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 ARL16Q0P5N6 197 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 OR2F1Q13607 317 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 VWC2Q2TAL6 325 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 ZNF343Q6P1L6 599 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 C8orf86Q6ZUL3 223 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 OR4X1Q8NH49 305 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 ZNF502Q8TBZ5 544 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 SCARB1Q8WTV0 552 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 PPP1R14BQ96C90 147 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 MISP3Q96FF7 219 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 MS4A10Q96PG2 267 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 C19orf24Q9BVV8 132 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 GAR1Q9NY12 217 aaKnown RBP8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 COL6A5A8TX70 2615 aa8.87□□□□□ -0.99
ARFGEF1-202ENST00000517955 CST7O76096 145 aa8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 NHLH2Q02577 135 aa8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 OR8G2PQ6IF36 304 aa8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 SLC16A13Q7RTY0 426 aa8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 EEF1AKMT3Q96AZ1 226 aa8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 C21orf62Q9NYP8 219 aa8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 TSSC4Q9Y5U2 329 aaPredicted RBP8.86□□□□□ -0.99
ARFGEF1-202ENST00000517955 TENM1Q9UKZ4 2725 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 A0A0D9SG52 128 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 MFSD2BA6NFX1 497 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 F8W735 103 aaPredicted RBP8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 CD28P10747 220 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 NPBWR1P48145 328 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 MFAP4P55083 255 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 KRTAP10-3P60369 221 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 SLC38A11Q08AI6 406 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 GAMTQ14353 236 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 MLANAQ16655 118 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 ZFP69Q49AA0 526 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 TMEM144Q7Z5S9 345 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 KCNRGQ8N5I3 272 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 OR1S2Q8NGQ3 325 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 CITED1Q99966 193 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 MFFQ9GZY8 342 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 NPVFQ9HCQ7 196 aa8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 PAIP2BQ9ULR5 123 aaKnown RBP8.85□□□□□ -0.99
ARFGEF1-202ENST00000517955 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 TRAV30A0A087WSZ9 112 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 TCRBV4S1A1TA0A5B7 111 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 I3L521 148 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 TAAR5O14804 337 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 ARPC5O15511 151 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 CLN5O75503 358 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 DFFBO76075 338 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 LGALS1P09382 135 aaKnown RBP8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 SPSB3Q6PJ21 355 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 LCNL1Q6ZST4 164 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 NDUFA11Q86Y39 141 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 TMEM217Q8N7C4 229 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 THAP8Q8NA92 274 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 OR5C1Q8NGR4 320 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 C4orf3Q8WVX3 66 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 BSCL2Q96G97 398 aaPredicted RBP8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 CCDC140Q96MF4 163 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 ZNF747Q9BV97 191 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 TMEM147Q9BVK8 224 aa8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 PARD6GQ9BYG4 376 aaPredicted RBP8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 LSM4Q9Y4Z0 139 aaKnown RBP8.84□□□□□ -0.99
ARFGEF1-202ENST00000517955 MPDU1O75352 247 aa8.83□□□□□ -1
ARFGEF1-202ENST00000517955 CXCL2P19875 107 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms