RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 CISHQ9NSE2 258 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 OR5AC2Q9NZP5 309 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 GUCA1BQ9UMX6 200 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 IGF2RP11717 2491 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
SKP1-203ENST00000517625 HTTP42858 3142 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 IGKV2D-26A0A0A0MRZ7 120 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 A0A0D9SG52 128 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 PSMD12O00232 456 aaPredicted RBP0.79□□□□□ -2.28
SKP1-203ENST00000517625 IFNA10P01566 189 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 IFNA5P01569 189 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 UBBP0CG47 229 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 CD79AP11912 226 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 SULT1A1P50225 295 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 SUPT4H1P63272 117 aaKnown RBP0.79□□□□□ -2.28
SKP1-203ENST00000517625 AADACL3Q5VUY0 350 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.79□□□□□ -2.28
SKP1-203ENST00000517625 LINC00471Q8N535 108 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 ZNF439Q8NDP4 499 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 ARL5BQ96KC2 179 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 SCGB3A1Q96QR1 104 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 NIPSNAP1Q9BPW8 284 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 TRABDQ9H4I3 376 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 CKLFQ9UBR5 152 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 FAM186AA6NE01 2351 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 FLG2Q5D862 2391 aaPredicted RBP0.79□□□□□ -2.28
SKP1-203ENST00000517625 KIF24Q5T7B8 1368 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 RTTNQ86VV8 2226 aa0.79□□□□□ -2.28
SKP1-203ENST00000517625 COL12A1Q99715 3063 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 LAMB2P55268 1798 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 PIEZO2Q9H5I5 2752 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.78□□□□□ -2.28
SKP1-203ENST00000517625 C19orf84I3L1E1 186 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 OR5F1O95221 314 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 HLA-DRB1P01911 266 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 CLPSP04118 112 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 COX6A1P12074 109 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 SPCS3P61009 180 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 HBA1P69905 142 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 CDK10Q15131 360 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 IMPG1Q17R60 797 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 PTRHD1Q6GMV3 140 aaKnown RBP0.78□□□□□ -2.28
SKP1-203ENST00000517625 LPCAT3Q6P1A2 487 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 LCN15Q6UWW0 184 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 ZNF826PQ6ZT77 177 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 TMEM86BQ8N661 226 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 WFDC11Q8NEX6 87 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 PFN4Q8NHR9 129 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 MRPL57Q9BQC6 102 aaKnown RBP0.78□□□□□ -2.28
SKP1-203ENST00000517625 C20orf27Q9GZN8 174 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 VPS29Q9UBQ0 182 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 NOSIPQ9Y314 301 aaKnown RBP0.78□□□□□ -2.28
SKP1-203ENST00000517625 CFAP54Q96N23 3096 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 PRRC2BQ5JSZ5 2229 aaKnown RBP0.78□□□□□ -2.28
SKP1-203ENST00000517625 SETD5Q9C0A6 1442 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 MTORP42345 2549 aa0.78□□□□□ -2.28
SKP1-203ENST00000517625 PIK3C2AO00443 1686 aa0.78□□□□□ -2.29
SKP1-203ENST00000517625 PPRC1Q5VV67 1664 aaKnown RBP0.78□□□□□ -2.29
SKP1-203ENST00000517625 FCGBPQ9Y6R7 5405 aaPredicted RBP0.78□□□□□ -2.29
SKP1-203ENST00000517625 DSPP15924 2871 aaKnown RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 GOLGB1Q14789 3259 aaKnown RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 TRAV14DV4A0A0A6YYC5 116 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 HCRTO43612 131 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 NIPSNAP2O75323 286 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 IFNA16P05015 189 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 SERPINA6P08185 405 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 HIST1H1TP22492 207 aaPredicted RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 EIF2B2P49770 351 aaKnown RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 SNRPD2P62316 118 aaKnown RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 UBE2IP63279 158 aaKnown RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 ZNF846Q147U1 533 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 SURF2Q15527 256 aaPredicted RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 ACOT6Q3I5F7 207 aaPredicted RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 SPANXN5Q5MJ07 72 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 PHF13Q86YI8 300 aaPredicted RBP0.77□□□□□ -2.29
SKP1-203ENST00000517625 ZNF565Q8N9K5 539 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 OR5B17Q8NGF7 314 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 TOMM6Q96B49 74 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 PARVGQ9HBI0 331 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 FBXL12Q9NXK8 326 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 TTC21AQ8NDW8 1320 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 NUP155O75694 1391 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 MALRD1Q5VYJ5 2156 aa0.77□□□□□ -2.29
SKP1-203ENST00000517625 SDK1Q7Z5N4 2213 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 CCDC88CQ9P219 2028 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 PTPRSQ13332 1948 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 PQLC2LA1A4F0 135 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 TCL1BO95988 128 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 IGKV1-5P01602 117 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 RNASE3P12724 160 aaKnown RBP0.76□□□□□ -2.29
SKP1-203ENST00000517625 RUNX1Q01196 453 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 DEFB115Q30KQ5 88 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 DPPA3Q6W0C5 159 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 MIR17HGQ75NE6 70 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 C15orf53Q8NAA6 179 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 OR4C6Q8NH72 309 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 DCUN1D1Q96GG9 259 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 REG4Q9BYZ8 158 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 TMEM56-RWDD3S4R434 201 aa0.76□□□□□ -2.29
SKP1-203ENST00000517625 COL7A1Q02388 2944 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms