RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 NSRP1Q9H0G5 558 aaKnown RBP-3.15□□□□□ -2.91
RNU6-542P-201ENST00000516405 RWDD1Q9H446 243 aaPredicted RBP-3.15□□□□□ -2.91
RNU6-542P-201ENST00000516405 LINC00472Q9H8W2 130 aa-3.15□□□□□ -2.91
RNU6-542P-201ENST00000516405 PCTPQ9UKL6 214 aa-3.15□□□□□ -2.91
RNU6-542P-201ENST00000516405 SLC35A3Q9Y2D2 325 aa-3.15□□□□□ -2.91
RNU6-542P-201ENST00000516405 KCNE1BA0A087WTH5 132 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 GOLGA8RI6L899 631 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 M0QYV0 167 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 SPINK8P0C7L1 97 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 FGF6P10767 208 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 PPIBP23284 216 aaKnown RBP-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 S100A7P31151 101 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 AP2S1P53680 142 aaPredicted RBP-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 AIF1P55008 147 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 CCDC152Q4G0S7 254 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 SAPCD1Q5SSQ6 148 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 FAM122BQ7Z309 247 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 ATP5L2Q7Z4Y8 100 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 EXOC8Q8IYI6 725 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 NECAB1Q8N987 351 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 OR10AG1Q8NH19 301 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 TMEM237Q96Q45 408 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 SCGB3A1Q96QR1 104 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 CENPKQ9BS16 269 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 CCDC94Q9BW85 323 aaPredicted RBP-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 GON7Q9BXV9 100 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 DLEC1Q9Y238 1755 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 ANK1P16157 1881 aa-3.16□□□□□ -2.92
RNU6-542P-201ENST00000516405 COL4A6Q14031 1691 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 RANBP2P49792 3224 aaKnown RBP-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 NPATQ14207 1427 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 A0A0J9YY99 117 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 LOC101927531A0A1B0GV80 90 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 PQLC2LA1A4F0 135 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 COX7A2LO14548 114 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 RAB13P51153 203 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 FAM74A4Q5TZK3 123 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 LINC00299Q6ZSB3 139 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 DEFB132Q7Z7B7 95 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 OR52E4Q8NGH9 312 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 OR13D1Q8NGV5 346 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 GPER1Q99527 375 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 FXYD6Q9H0Q3 95 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 C1orf21Q9H246 121 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 IDI2-AS1Q9NZ38 188 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 IL36BQ9NZH7 164 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 RSL24D1Q9UHA3 163 aaKnown RBP-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 KIF3AQ9Y496 699 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 SNX10Q9Y5X0 201 aa-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 COL14A1Q05707 1796 aaKnown RBP-3.17□□□□□ -2.92
RNU6-542P-201ENST00000516405 DNAH5Q8TE73 4624 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 WNK3Q9BYP7 1800 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 FAM25EA8MYX2 175 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 SPINK4O60575 86 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 ERC2-IT1O76042 136 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 DLX6P56179 175 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 TPRG1LQ5T0D9 272 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 ASCL4Q6XD76 172 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 Q8IYB0 196 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 MICU2Q8IYU8 434 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 SMIM11BQ8TCY0 68 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 GINS4Q9BRT9 223 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 RAB1BQ9H0U4 201 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 ACOT13Q9NPJ3 140 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 ANAPC10Q9UM13 185 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 MYO5AQ9Y4I1 1855 aaKnown RBP-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 ATMQ13315 3056 aa-3.18□□□□□ -2.92
RNU6-542P-201ENST00000516405 TTC41PQ6P2S7 1318 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 ARHGEF11O15085 1522 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 ARHGEF28Q8N1W1 1705 aaKnown RBP-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 DNAH17Q9UFH2 4485 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 KANK1Q14678 1352 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 FXYD6-FXYD2A0A087WZ82 144 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 SMCO3A2RU48 225 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 IFITM5A6NNB3 132 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 STOMP27105 288 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 PPP1R7Q15435 360 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 BRMS1LQ5PSV4 323 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 C4orf22Q6V702 233 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 CLVS1Q8IUQ0 354 aaPredicted RBP-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 OR7G1Q8NGA0 311 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 OR2T35Q8NGX2 323 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 ZNF431Q8TF32 576 aaPredicted RBP-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 GPR146Q96CH1 333 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 C9orf72Q96LT7 481 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 AGPAT4-IT1Q9H0P7 198 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 ARMC7Q9H6L4 198 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 DMAC2Q9NW81 257 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 LYARQ9NX58 379 aaKnown RBP-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 CASKIN1Q8WXD9 1431 aa-3.19□□□□□ -2.92
RNU6-542P-201ENST00000516405 ADGRB1O14514 1584 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 HECW2Q9P2P5 1572 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 TRGV1A0A0A0MS02 117 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 TMED7-TICAM2A0A0A6YYA0 188 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 B4DSR2 109 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 E7EUB6 86 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 IGHV3-30P01768 117 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 IGHV3-30-5P0DP03 117 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 PSMA5P28066 241 aa-3.2□□□□□ -2.92
RNU6-542P-201ENST00000516405 IQCJQ1A5X6 159 aa-3.2□□□□□ -2.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms