RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 SCGB2A1O75556 95 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 VAMP1P23763 118 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 ATP5IP56385 69 aaPredicted RBP8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SMCO1Q147U7 214 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 RBMS2Q15434 407 aaKnown RBP8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 BAK1Q16611 211 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 BTNL8Q6UX41 500 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 CENPSQ8N2Z9 138 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 LRTM2Q8N967 370 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OR10C1Q96KK4 312 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 PRR13Q9NZ81 148 aa8.43□□□□□ -1.06
SCARNA16.1-201ENST00000516133 RPS10-NUDT3A0A1W2PQS6 291 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OR11H12B2RN74 326 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SCAF4O95104 1147 aaKnown RBP8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TMEM50AO95807 157 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 CD7P09564 240 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OPRK1P41145 380 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 UBE2MP61081 183 aaKnown RBP8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TNFRSF9Q07011 255 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SLC24A4Q8NFF2 622 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OR52B4Q8NGK2 314 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OR4X1Q8NH49 305 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 RNASEH2CQ8TDP1 164 aaKnown RBP8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 C7orf50Q9BRJ6 194 aaKnown RBP8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 HSPB7Q9UBY9 170 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SMPXQ9UHP9 88 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 U3KQ87 197 aa8.42□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TRAV30A0A087WSZ9 112 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TRAV14DV4A0A0A6YYC5 116 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 IGHV7-4-1A0A0J9YVY3 117 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TSPAN4O14817 238 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 CLN5O75503 358 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 NDUFB6O95139 128 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SFT2D2O95562 160 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SLC25A4P12235 298 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SLC25A6P12236 298 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 BMI1P35226 326 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 ETFRF1Q6IPR1 90 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TOMM20LQ6UXN7 152 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 ZNF600Q6ZNG1 722 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 LINC00299Q6ZSB3 139 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TMEM116Q8NCL8 245 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OR1S1Q8NH92 325 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 RCHY1Q96PM5 261 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SPAG8Q99932 426 aaPredicted RBP8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TM2D3Q9BRN9 247 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 GINS3Q9BRX5 216 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 TMED3Q9Y3Q3 217 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SELENOKQ9Y6D0 94 aa8.41□□□□□ -1.06
SCARNA16.1-201ENST00000516133 IGHV3OR16-8A0A075B7F1 116 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 ZNF207O43670 478 aaKnown RBP8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 IFNA10P01566 189 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 CD5P06127 495 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 IL7P13232 177 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 NPY1RP25929 384 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 PPP1R1AQ13522 171 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 MLANAQ16655 118 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 HAGHQ16775 308 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 CNPY1Q3B7I2 92 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 LINC00322Q6ZN03 302 aaPredicted RBP8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 DEFB125Q8N687 156 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 DTD1Q8TEA8 209 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 SDHCQ99643 169 aaPredicted RBP8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.06
SCARNA16.1-201ENST00000516133 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 CHEK1O14757 476 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 PITX3O75364 302 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 NXPH3O95157 252 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 ZNF414Q96IQ9 312 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 SPATA25Q9BR10 227 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 RBKSQ9H477 322 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 SRD5A3Q9H8P0 318 aa8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 PUS1Q9Y606 427 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCARNA16.1-201ENST00000516133 C9orf170A2RU37 121 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 MED6O75586 246 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 IGKV1-17P01599 117 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 IFNA4P05014 189 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 NPPCP23582 126 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 CMC4P56277 68 aaPredicted RBP8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 PAFAH1B2P68402 229 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 PRSS54Q6PEW0 395 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 Q8WTZ3 238 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 TMEM170AQ8WVE7 144 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 RNF2Q99496 336 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 FAM110AQ9BQ89 295 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 TMEM231Q9H6L2 316 aa8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 MRPL36Q9P0J6 103 aaKnown RBP8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 HUWE1Q7Z6Z7 4374 aaKnown RBP8.38□□□□□ -1.07
SCARNA16.1-201ENST00000516133 IGHV3-49A0A0A0MS15 119 aa8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 A0A1W2PS18 150 aa8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 RBMY1BA6NDE4 496 aaKnown RBP8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 RBMY1EA6NEQ0 496 aaKnown RBP8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 HOXB5P09067 269 aa8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 OR4E1P0C645 316 aa8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 RBMY1DP0C7P1 496 aaKnown RBP8.37□□□□□ -1.07
SCARNA16.1-201ENST00000516133 IGLC1P0CG04 106 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms