RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 Q5PR19 223 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 AVPI1Q5T686 147 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 OR8G2PQ6IF36 304 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 OR4A47Q6IF82 309 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 WFDC11Q8NEX6 87 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 LINC01560Q8TB33 94 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 TMEM204Q9BSN7 226 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 RSG1Q9BU20 258 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 QTRT1Q9BXR0 403 aaKnown RBP6.62□□□□□ -1.35
SFXN1-211ENST00000515736 MAP1LC3BQ9GZQ8 125 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 SLC35D1Q9NTN3 355 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 SLC39A9Q9NUM3 307 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 TCF19Q9Y242 345 aa6.62□□□□□ -1.35
SFXN1-211ENST00000515736 NIPBLQ6KC79 2804 aaeCLIP6.62□□□□□ -1.35
SFXN1-211ENST00000515736 ABCA2Q9BZC7 2435 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 HRNRQ86YZ3 2850 aaPredicted RBP6.61□□□□□ -1.35
SFXN1-211ENST00000515736 A0A1W2PRV1 198 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 C7orf77A4D0Y5 90 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 PRSS46E5RG02 174 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 M0R036 132 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 UPK2O00526 184 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 TGOLN2O43493 480 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 USF1P22415 310 aaPredicted RBP6.61□□□□□ -1.35
SFXN1-211ENST00000515736 NFYBP25208 207 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 HOXA1P49639 335 aaPredicted RBP6.61□□□□□ -1.35
SFXN1-211ENST00000515736 SNRPEP62304 92 aaKnown RBP6.61□□□□□ -1.35
SFXN1-211ENST00000515736 PRCDQ00LT1 54 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 TMEM155Q4W5P6 130 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 ZNF383Q8NA42 475 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 DEFB108BQ8NET1 73 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 SLC24A4Q8NFF2 622 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 OR4C13Q8NGP0 309 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 OR13D1Q8NGV5 346 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 OR9G1Q8NH87 305 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 NANPQ8TBE9 248 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 MALSU1Q96EH3 234 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 TVP23CQ96ET8 276 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 SMR3AQ99954 134 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 C19orf24Q9BVV8 132 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 NPVFQ9HCQ7 196 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 RPS10P5Q9NQ39 176 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 MLXQ9UH92 298 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 ARL2-SNX15V9GYD0 113 aa6.61□□□□□ -1.35
SFXN1-211ENST00000515736 A0A1W2PN81 502 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 SLC31A2O15432 143 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 KBTBD11O94819 623 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CT45A6P0DMU7 189 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CT45A5P0DMU8 189 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CT45A7P0DMV0 189 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CTRB1P17538 263 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 NPY1RP25929 384 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 LOXP28300 417 aaPredicted RBP6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CHRNA7P36544 502 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 MEF2BQ02080 365 aaPredicted RBP6.6□□□□□ -1.35
SFXN1-211ENST00000515736 UBE2V1Q13404 147 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 ZNF672Q499Z4 452 aaPredicted RBP6.6□□□□□ -1.35
SFXN1-211ENST00000515736 C2orf83Q53S99 150 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 FFAR4Q5NUL3 377 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 FAM201AQ5SY85 155 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CTRB2Q6GPI1 263 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 MUC15Q8N387 334 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 OR10G9Q8NGN4 311 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 OR10G7Q8NGN6 311 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 OR1L8Q8NGR8 309 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 OR10X1Q8NGY0 326 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 C8orf46Q8TAG6 207 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 CCL17Q92583 94 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 LHX4Q969G2 390 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 SSX3Q99909 188 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 RAB1BQ9H0U4 201 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 PLEKHA3Q9HB20 300 aa6.6□□□□□ -1.35
SFXN1-211ENST00000515736 AMMECR1Q9Y4X0 333 aaPredicted RBP6.6□□□□□ -1.35
SFXN1-211ENST00000515736 C5orf52A6NGY3 159 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 COLCA2A8K830 154 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 H3BQ15 152 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 DVL1O14640 695 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 NUPL2O15504 423 aaKnown RBP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 PDE6DO43924 150 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 MT-CO2P00403 227 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 RPL29P47914 159 aaKnown RBP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 LGALS7P47929 136 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 CDC34P49427 236 aaPredicted RBP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 SUB1P53999 127 aaKnown RBP eCLIP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 PRRX1P54821 245 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 DLX6P56179 175 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 RAB5BP61020 215 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 CCL20P78556 96 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 ZNF726P1Q15940 193 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 HAGHQ16775 308 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 BSXQ3C1V8 233 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 VMA21Q3ZAQ7 101 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 FAM53AQ6NSI3 398 aaPredicted RBP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 CBLN2Q8IUK8 224 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 PNKDQ8N490 385 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 RPP25LQ8N5L8 163 aaKnown RBP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 CYB561D1Q8N8Q1 229 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 TMEM167AQ8TBQ9 72 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 CACNG8Q8WXS5 425 aa6.59□□□□□ -1.35
SFXN1-211ENST00000515736 FLYWCH2Q96CP2 140 aaKnown RBP6.59□□□□□ -1.35
SFXN1-211ENST00000515736 TIMD4Q96H15 378 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms