RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 CLIP1P30622 1438 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 VPS8Q8N3P4 1428 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 CAMSAP2Q08AD1 1489 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 TRAV40A0A0B4J280 105 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 GGT3PA6NGU5 568 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 TMEM212A6NML5 194 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 BUB1B-PAK6H3BSN5 160 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 IGHV3-7P01780 117 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 TRGC2P03986 189 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 COX4I1P13073 169 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 FOXA1P55317 472 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 MEF2BQ02080 365 aaPredicted RBP2.86□□□□□ -1.95
RUFY3-214ENST00000515442 ZNF117Q03924 483 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 RTL8BQ17RB0 113 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 MORN2Q502X0 79 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 LINC00483Q53H64 154 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.86□□□□□ -1.95
RUFY3-214ENST00000515442 FKBP1CQ5VVH2 108 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 NOXRED1Q6NXP6 359 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 LRRC28Q86X40 367 aaPredicted RBP2.86□□□□□ -1.95
RUFY3-214ENST00000515442 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 PACRGLQ8N7B6 248 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 OR10P1Q8NGE3 313 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 OR8J3Q8NGG0 315 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 C1orf54Q8WWF1 131 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 GPX7Q96SL4 187 aaPredicted RBP2.86□□□□□ -1.95
RUFY3-214ENST00000515442 TP73-AS1Q9UF72 201 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 MED31Q9Y3C7 131 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 DOCK3Q8IZD9 2030 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 BRWD3Q6RI45 1802 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 ABCA9Q8IUA7 1624 aa2.86□□□□□ -1.95
RUFY3-214ENST00000515442 TICRRQ7Z2Z1 1910 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 ATRXP46100 2492 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TRIP11Q15643 1979 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 ARHGAP21Q5T5U3 1957 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 CROCCQ5TZA2 2017 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TDRD6O60522 2096 aaKnown RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 ANKRD12Q6UB98 2062 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 A0A087X0T9 212 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 A0A0J9YW62 118 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TRDV1A0A1B0GX56 115 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 H3BPC8 53 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TXNDC9O14530 226 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 OVOL1O14753 267 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TAX1BP3O14907 124 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 MSMBP08118 114 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 SCTP09683 121 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 RPL7P18124 248 aaKnown RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 RPS3P23396 243 aaKnown RBP eCLIP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 NFYAP23511 347 aaPredicted RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 NFYBP25208 207 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 SRIP30626 198 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 CA5AP35218 305 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 SRP14P37108 136 aaKnown RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 XCL1P47992 114 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 EIF5AP63241 154 aaKnown RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 ZNF141Q15928 474 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 LINC01554Q52M75 96 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 C1orf140Q5VVS0 124 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 ZNF705AQ6ZN79 300 aaPredicted RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TMEM229BQ8NBD8 167 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 OR5C1Q8NGR4 320 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 SCRT1Q9BWW7 348 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TXNL4BQ9NX01 149 aaKnown RBP2.85□□□□□ -1.95
RUFY3-214ENST00000515442 HEY1Q9Y5J3 304 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 TECPR2O15040 1411 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 SCAPERQ9BY12 1400 aa2.85□□□□□ -1.95
RUFY3-214ENST00000515442 FANCAO15360 1455 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 DOCK5Q9H7D0 1870 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 A0A1B0GU33 70 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 LOC102725191A0A1B0GVB3 256 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 MEIS3P1A6NDR6 274 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 RFPL4AA6NLU0 287 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 RFPL4AL1F8VTS6 287 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 CST8O60676 142 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 SOD1P00441 154 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 GZMBP10144 247 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 CCL5P13501 91 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 PSMB8P28062 276 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 AQP4P55087 323 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 KLF3P57682 345 aaPredicted RBP2.84□□□□□ -1.95
RUFY3-214ENST00000515442 KRTAP12-2P59991 146 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 EIF3IQ13347 325 aaKnown RBP2.84□□□□□ -1.95
RUFY3-214ENST00000515442 MIR17HGQ75NE6 70 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 ZNF695Q8IW36 515 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 DYNAPQ8N1N2 210 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 TERB2Q8NHR7 220 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 DNAJC9Q8WXX5 260 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 SCGB3A1Q96QR1 104 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 SLC25A21Q9BQT8 299 aaPredicted RBP2.84□□□□□ -1.95
RUFY3-214ENST00000515442 YIPF3Q9GZM5 350 aa2.84□□□□□ -1.95
RUFY3-214ENST00000515442 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.84□□□□□ -1.96
RUFY3-214ENST00000515442 TRAPPC8Q9Y2L5 1435 aa2.84□□□□□ -1.96
RUFY3-214ENST00000515442 LTBP4Q8N2S1 1624 aa2.83□□□□□ -1.96
RUFY3-214ENST00000515442 BCORL1Q5H9F3 1711 aa2.83□□□□□ -1.96
RUFY3-214ENST00000515442 COL18A1P39060 1754 aa2.83□□□□□ -1.96
RUFY3-214ENST00000515442 IGLV4-60A0A075B6I1 120 aa2.83□□□□□ -1.96
RUFY3-214ENST00000515442 TRAV5A0A0B4J249 113 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms