RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 NDUFB6O95139 128 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 CD81P60033 236 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 TNFRSF9Q07011 255 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 CNPY1Q3B7I2 92 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 ANKRD55Q3KP44 614 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 BTNL8Q6UX41 500 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 SLC16A13Q7RTY0 426 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 SBSPONQ8IVN8 264 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 SLC24A4Q8NFF2 622 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
CLCN3-210ENST00000515420 HIPK2Q9H2X6 1198 aa9.62□□□□□ -0.87
CLCN3-210ENST00000515420 HEYLQ9NQ87 328 aaPredicted RBP9.62□□□□□ -0.87
CLCN3-210ENST00000515420 SFT2D2O95562 160 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 SLC25A4P12235 298 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 IL7P13232 177 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 VAMP1P23763 118 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 OPRK1P41145 380 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 ATP5IP56385 69 aaPredicted RBP9.61□□□□□ -0.87
CLCN3-210ENST00000515420 GUCA2BQ16661 112 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 RBPMS2Q6ZRY4 209 aaKnown RBP9.61□□□□□ -0.87
CLCN3-210ENST00000515420 OR4X1Q8NH49 305 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 WDR89Q96FK6 387 aaPredicted RBP9.61□□□□□ -0.87
CLCN3-210ENST00000515420 ZNF414Q96IQ9 312 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 WWC2-AS2Q96NR7 200 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 SPAG8Q99932 426 aaPredicted RBP9.61□□□□□ -0.87
CLCN3-210ENST00000515420 NEURL2Q9BR09 285 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 GINS3Q9BRX5 216 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 C20orf24Q9BUV8 137 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 FNDC4Q9H6D8 234 aaPredicted RBP9.61□□□□□ -0.87
CLCN3-210ENST00000515420 PRR13Q9NZ81 148 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 TMED3Q9Y3Q3 217 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 U3KQ87 197 aa9.61□□□□□ -0.87
CLCN3-210ENST00000515420 TRAV30A0A087WSZ9 112 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 FAM90A26D6RGX4 464 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 TSPAN4O14817 238 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 CLN5O75503 358 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 TMEM50AO95807 157 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 CD5P06127 495 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 BMI1P35226 326 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 PPP1R1AQ13522 171 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 LAMTOR1Q6IAA8 161 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 ZNF600Q6ZNG1 722 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 ASCL2Q99929 193 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 TM2D3Q9BRN9 247 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 TUBA4BQ9H853 241 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 ZMAT4Q9H898 229 aa9.6□□□□□ -0.87
CLCN3-210ENST00000515420 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 PITX3O75364 302 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 IGHV3-48P01763 117 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 CD7P09564 240 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 NPY1RP25929 384 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 BTCP35070 178 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 TMEM116Q8NCL8 245 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 OR52B4Q8NGK2 314 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 OR1S1Q8NH92 325 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 DTD1Q8TEA8 209 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 FAM110AQ9BQ89 295 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 CCDC32Q9BV29 185 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 SMPXQ9UHP9 88 aa9.59□□□□□ -0.87
CLCN3-210ENST00000515420 STAB2Q8WWQ8 2551 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 TRAV14DV4A0A0A6YYC5 116 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 OR11H12B2RN74 326 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 YIF1AO95070 293 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
CLCN3-210ENST00000515420 LINC00322Q6ZN03 302 aaPredicted RBP9.58□□□□□ -0.88
CLCN3-210ENST00000515420 TMEM170AQ8WVE7 144 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 RBKSQ9H477 322 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 ZFAND3Q9H8U3 227 aa9.58□□□□□ -0.88
CLCN3-210ENST00000515420 C9orf170A2RU37 121 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 CHEK1O14757 476 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 MED6O75586 246 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 NXPH3O95157 252 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 IFNA10P01566 189 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 PRSS54Q6PEW0 395 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 TOMM20LQ6UXN7 152 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 OR1S2Q8NGQ3 325 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 S100ZQ8WXG8 99 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 CIB3Q96Q77 187 aaPredicted RBP9.57□□□□□ -0.88
CLCN3-210ENST00000515420 SPATA25Q9BR10 227 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 RHPN1-AS1Q9BWJ2 59 aa9.57□□□□□ -0.88
CLCN3-210ENST00000515420 MRPL36Q9P0J6 103 aaKnown RBP9.57□□□□□ -0.88
CLCN3-210ENST00000515420 PUS1Q9Y606 427 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLCN3-210ENST00000515420 IGHV3OR16-8A0A075B7F1 116 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 OR4C46A6NHA9 309 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 A6NHS1 94 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 LYRM1O43325 122 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 IGKV1-17P01599 117 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 OR4E1P0C645 316 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 RND2P52198 227 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 YPEL3P61236 119 aaPredicted RBP9.56□□□□□ -0.88
CLCN3-210ENST00000515420 DHRS2Q13268 280 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 MLANAQ16655 118 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 HAGHQ16775 308 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 LYG2Q86SG7 212 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 DEFB125Q8N687 156 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 COQ8AQ8NI60 647 aa9.56□□□□□ -0.88
CLCN3-210ENST00000515420 VSIRQ9H7M9 311 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms