RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RPH3ALQ9UNE2 315 aa4.88□□□□□ -1.63
CLDND1-229ENST00000513988 IBA57-AS1B1ANH7 110 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 F6UB75 175 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 MT-CO2P00403 227 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 RLN2P04090 185 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 CD36P16671 472 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 PRR4Q16378 134 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 TEPPQ6URK8 271 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 C16orf54Q6UWD8 224 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 ZNF493Q6ZR52 646 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 CROCCP2Q86T23 111 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 GPR148Q8TDV2 347 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 LSM10Q969L4 123 aaKnown RBP4.87□□□□□ -1.63
CLDND1-229ENST00000513988 ORAI1Q96D31 301 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 LINC01587Q99440 93 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 AIFM2Q9BRQ8 373 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 C12orf4Q9NQ89 552 aa4.87□□□□□ -1.63
CLDND1-229ENST00000513988 A0A0B4J293 547 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 M0R2Z0 102 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 UPK2O00526 184 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 FABP7O15540 132 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 FAM107AO95990 144 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 COX4I1P13073 169 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 ID1P41134 155 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 ETV6P41212 452 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 NPBWR1P48145 328 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 GBX2P52951 348 aaPredicted RBP4.86□□□□□ -1.63
CLDND1-229ENST00000513988 TAS2R60P59551 318 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 EFNB1P98172 346 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 TBCEQ15813 527 aaPredicted RBP4.86□□□□□ -1.63
CLDND1-229ENST00000513988 SPINK13Q1W4C9 94 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 KDM4DQ6B0I6 523 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 C9orf47Q6ZRZ4 202 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 NEGR1Q7Z3B1 354 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 BAP18Q8IXM2 172 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 OR1L8Q8NGR8 309 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 OR1P1Q8NH06 330 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 TMEM230Q96A57 120 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 PINX1Q96BK5 328 aaKnown RBP4.86□□□□□ -1.63
CLDND1-229ENST00000513988 MRPL48Q96GC5 212 aaKnown RBP4.86□□□□□ -1.63
CLDND1-229ENST00000513988 GINS4Q9BRT9 223 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 CKLFQ9UBR5 152 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 VAX2Q9UIW0 290 aa4.86□□□□□ -1.63
CLDND1-229ENST00000513988 TRBV6-7A0A0A0MS04 114 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 A0A0J9YX75 114 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 TEX50A0A1B0GTY4 177 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 TMEM14DPA8MWL7 114 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 CRXO43186 299 aaPredicted RBP4.85□□□□□ -1.63
CLDND1-229ENST00000513988 HSD17B1P14061 328 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 PRKACGP22612 351 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 DCKP27707 260 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 PRCDQ00LT1 54 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 DHODHQ02127 395 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 MRPL23Q16540 153 aaKnown RBP4.85□□□□□ -1.63
CLDND1-229ENST00000513988 SFXN4Q6P4A7 337 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 AMTNQ6UX39 209 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 SIGLEC15Q6ZMC9 328 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 HS3ST5Q8IZT8 346 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 TMEM256Q8N2U0 113 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 OR8J1Q8NGP2 316 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 RNASE8Q8TDE3 154 aaKnown RBP4.85□□□□□ -1.63
CLDND1-229ENST00000513988 TMEM263Q8WUH6 116 aaKnown RBP4.85□□□□□ -1.63
CLDND1-229ENST00000513988 NRBF2Q96F24 287 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 HSD17B10Q99714 261 aaKnown RBP4.85□□□□□ -1.63
CLDND1-229ENST00000513988 CABLES2Q9BTV7 478 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 CDIP1Q9H305 208 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 MAGIXQ9H6Y5 334 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 DOK5Q9P104 306 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 KLK11Q9UBX7 282 aa4.85□□□□□ -1.63
CLDND1-229ENST00000513988 RBMX2Q9Y388 322 aaKnown RBP4.85□□□□□ -1.63
CLDND1-229ENST00000513988 E9PI62 339 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 HNRNPCP07910 306 aaKnown RBP eCLIP4.84□□□□□ -1.63
CLDND1-229ENST00000513988 FGF2P09038 288 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 CD37P11049 281 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 GYPEP15421 78 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 UCP1P25874 307 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 PSMB3P49720 205 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 TMED1Q13445 227 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 SMN1Q16637 294 aaKnown RBP4.84□□□□□ -1.63
CLDND1-229ENST00000513988 IBA57Q5T440 356 aaKnown RBP4.84□□□□□ -1.63
CLDND1-229ENST00000513988 GPR141Q7Z602 305 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 Q8N976 141 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 OR52E5Q8NH55 327 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 RFKQ969G6 155 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 TMEM203Q969S6 136 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 CMSS1Q9BQ75 279 aaKnown RBP4.84□□□□□ -1.63
CLDND1-229ENST00000513988 TMEM59Q9BXS4 323 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 DCSTAMPQ9H295 470 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 NDUFA4L2Q9NRX3 87 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 SPATA2Q9UM82 520 aa4.84□□□□□ -1.63
CLDND1-229ENST00000513988 TRAV12-2A0A075B6T6 113 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 TRAV8-7A0A075B6U6 113 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 C9orf118A6NHY6 69 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 SAC3D1A6NKF1 404 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 GNGT2O14610 69 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 TMEM50AO95807 157 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 GATA2P23769 480 aaPredicted RBP4.83□□□□□ -1.64
CLDND1-229ENST00000513988 BRWD1-AS2P59051 145 aa4.83□□□□□ -1.64
CLDND1-229ENST00000513988 ZNF415Q09FC8 603 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms