RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 SVEP1Q4LDE5 3571 aa3.56□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF407Q9C0G0 2248 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV4-61A0A0C4DH41 118 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 RNF222A6NCQ9 220 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 BTBD17A6NE02 478 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 MPTX1A8MV57 137 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 C17orf112F2Z3M2 114 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 TRIM77I1YAP6 450 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 PITX3O75364 302 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 CRLF1O75462 422 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV4-59P01825 116 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 MBP02144 154 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 OR8U8P0C7N1 319 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 SEC11BP0C7V7 166 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 SAA2P0DJI9 122 aaPredicted RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 USF1P22415 310 aaPredicted RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 HTR1DP28221 377 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 MAS1LP35410 378 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 G6PCP35575 357 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 HTR2BP41595 481 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 SULT1A1P50225 295 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF137PP52743 207 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 UBE2KP61086 200 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 POLR2GP62487 172 aaKnown RBP eCLIP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ERHP84090 104 aaKnown RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 TNFRSF9Q07011 255 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF816Q0VGE8 651 aaPredicted RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 PNRC1Q12796 327 aaPredicted RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 EXOSC2Q13868 293 aaKnown RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 POU2AF1Q16633 256 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 SPRNQ5BIV9 151 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 Q5BKY6 102 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 MINOS1Q5TGZ0 78 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 TEX38Q6PEX7 206 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 LYPD2Q6UXB3 125 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 DPPA3Q6W0C5 159 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF833PQ6ZTB9 187 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 HSD17B13Q7Z5P4 300 aaPredicted RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF429Q86V71 674 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 PUSL1Q8N0Z8 303 aaKnown RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 COMMD1Q8N668 190 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 TEX29Q8N6K0 151 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 UBAC2Q8NBM4 344 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 LY6G5BQ8NDX9 201 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 WFDC11Q8NEX6 87 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 OR10P1Q8NGE3 313 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 OR5B3Q8NH48 314 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 UBALD1Q8TB05 177 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 FAM210AQ96ND0 272 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF251Q9BRH9 671 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 COMMD5Q9GZQ3 224 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 IFI27L2Q9H2X8 130 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 LPAR2Q9HBW0 351 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 MED9Q9NWA0 146 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 RCL1Q9Y2P8 373 aaKnown RBP3.55□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF257Q9Y2Q1 563 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 FBXO7Q9Y3I1 522 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 MINOS1-NBL1R4GNA1 71 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 WNK1Q9H4A3 2382 aa3.55□□□□□ -1.84
CLDND1-228ENST00000513873 PHF3Q92576 2039 aaKnown RBP3.54□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV4-4A0A075B6R2 117 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 IGHV2-26A0A0B4J1V2 119 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 LINC00862A6NCI5 91 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 G3V3Q6 166 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 BUB1B-PAK6H3BSN5 160 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 MPDU1O75352 247 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 SCGB2A1O75556 95 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 S1PR2O95136 353 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 CRYZL1O95825 349 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 IFNA10P01566 189 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 IGKV1-5P01602 117 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 HBE1P02100 147 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 PRH1P02810 166 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 TFF1P04155 84 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 ARG1P05089 322 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 SLC25A16P16260 332 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 CCL3L1P16619 93 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 PRTN3P24158 256 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 BRS3P32247 399 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 SNCAP37840 140 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 ATP5J2P56134 94 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 HSPE1P61604 102 aaKnown RBP3.54□□□□□ -1.84
CLDND1-228ENST00000513873 SERF2P84101 59 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 IFITM2Q01629 132 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 EWSR1Q01844 656 aaKnown RBP eCLIP3.54□□□□□ -1.84
CLDND1-228ENST00000513873 EIF4EBP1Q13541 118 aaPredicted RBP3.54□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF273Q14593 569 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 PDLIM3Q53GG5 364 aaPredicted RBP3.54□□□□□ -1.84
CLDND1-228ENST00000513873 RPL39P5Q59GN2 51 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 OR2B11Q5JQS5 317 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 SPANXN5Q5MJ07 72 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 AKR1C8PQ5T2L2 129 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 AVPI1Q5T686 147 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 UQCC3Q6UW78 93 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 ZNF841Q6ZN19 808 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 MOB3BQ86TA1 216 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 STPG2Q8N412 459 aa3.54□□□□□ -1.84
CLDND1-228ENST00000513873 TMEM252Q8N6L7 170 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms