RNA–Protein interactions for RNA: ENST00000513600.5

TRAPPC11-210, Transcript of trafficking protein particle complex 11, humanhuman

TSL 3

Gene TRAPPC11, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-210ENST00000513600 SRSF6Q13247 344 aaKnown RBP0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 KCNJ8Q15842 424 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 DEFB128Q7Z7B8 93 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR6V1Q8N148 313 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 PFN4Q8NHR9 129 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 TMEM106AQ96A25 262 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 PPP1R14BQ96C90 147 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 PRAP1Q96NZ9 151 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 SCGB3A1Q96QR1 104 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 CMSS1Q9BQ75 279 aaKnown RBP0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 DCSTAMPQ9H295 470 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 PKIGQ9Y2B9 76 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 ZFP30Q9Y2G7 519 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 MAST2Q6P0Q8 1798 aa0.57□□□□□ -2.32
TRAPPC11-210ENST00000513600 NCOA1Q15788 1441 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 A0A0D9SG52 128 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 EXOC1LA0A1B0GW35 172 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 FUOMA2VDF0 154 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 SMIM9A6NGZ8 99 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 TMEM114B3SHH9 223 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 CNIH1O95406 144 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 CRYZL1O95825 349 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 CLPSP04118 112 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 HTR1AP08908 422 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 RBP1P09455 135 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 SMIM10L2AP0DMW4 78 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 SMIM10L2BP0DMW5 78 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 ZNF93P35789 620 aaPredicted RBP0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 RPS20P60866 119 aaKnown RBP0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 FADDQ13158 208 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 KISS1Q15726 138 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 AKIRIN2Q53H80 203 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 TMEM97Q5BJF2 176 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 MIR17HGQ75NE6 70 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 C12orf45Q8N5I9 185 aaPredicted RBP0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 TERB2Q8NHR7 220 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 CT55Q8WUE5 264 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 H1FXQ92522 213 aaKnown RBP0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 TRIM4Q9C037 500 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 MIXL1Q9H2W2 232 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 C11orf68Q9H3H3 251 aaKnown RBP0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 GLTPQ9NZD2 209 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 CKLFQ9UBR5 152 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 TP73-AS1Q9UF72 201 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 KIF13BQ9NQT8 1826 aa0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 ASCC3Q8N3C0 2202 aaKnown RBP0.56□□□□□ -2.32
TRAPPC11-210ENST00000513600 SNRNP200O75643 2136 aaKnown RBP0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 FAM236DA0A1B0GTK5 79 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 hADV38S2A0JD32 116 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 TMEM210A6NLX4 147 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 BUB1B-PAK6H3BSN5 160 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 PIRO00625 290 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 FADS1O60427 444 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 TCL1BO95988 128 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 CTXN2P0C2S0 81 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 FAM236CP0DP71 79 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 COX6A1P12074 109 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 AP3S2P59780 193 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 ERVS71-1P61550 626 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 C12orf74Q32Q52 190 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 LCN15Q6UWW0 184 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 DPPA3Q6W0C5 159 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 Q6ZQT0 140 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 ZNF826PQ6ZT77 177 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 OOSP2Q86WS3 158 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 GDPD1Q8N9F7 314 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR4D11Q8NGI4 311 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 C2orf50Q96LR7 162 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 TMEM147Q9BVK8 224 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 CCDC90BQ9GZT6 254 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 TLNRD1Q9H1K6 362 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 SLC39A9Q9NUM3 307 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 IDI2-AS1Q9NZ38 188 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 FBXO5Q9UKT4 447 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 PRELID3BQ9Y3B1 194 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 ROBO3Q96MS0 1386 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 ZFYVE9O95405 1425 aa0.55□□□□□ -2.32
TRAPPC11-210ENST00000513600 NEO1Q92859 1461 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 TOPBP1Q92547 1522 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 EXPH5Q8NEV8 1989 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 hCG_1818297A0A087WSY0 165 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 A8MT66 165 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 PDE6DO43924 150 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR2J2O76002 312 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR7C1O76099 320 aaPredicted RBP0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 OR5F1O95221 314 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 ZNF682O95780 498 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 SERPINE1P05121 402 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 CTSDP07339 412 aaPredicted RBP0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 C8GP07360 202 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 PPIBP23284 216 aaKnown RBP0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 BRS3P32247 399 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 CDC42P60953 191 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 YPEL3P61236 119 aaPredicted RBP0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 SPA17Q15506 151 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 SPANXN5Q5MJ07 72 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 TRAPPC6BQ86SZ2 158 aa0.54□□□□□ -2.32
TRAPPC11-210ENST00000513600 BPIFA4PQ86YQ2 179 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms