RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 TMEM14DPA8MWL7 114 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 MFNGO00587 321 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 NQO2P16083 231 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 ELK1P19419 428 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 TDRG1Q3Y452 100 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 SIGLEC15Q6ZMC9 328 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 HSD17B11Q8NBQ5 300 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 ATP6V1G3Q96LB4 118 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 SLC29A1Q99808 456 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 LPAR5Q9H1C0 372 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 KCNK15Q9H427 330 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 TAS2R8Q9NYW2 309 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 SPATA2Q9UM82 520 aa6.1□□□□□ -1.43
CLCN3-208ENST00000512813 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-208ENST00000512813 A0A0J9YXV3 536 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 F6UB75 175 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 RBFOX2O43251 390 aaKnown RBP eCLIP6.09□□□□□ -1.431e-9■■■■■ 33.1
CLCN3-208ENST00000512813 TMEM50AO95807 157 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 BPNT1O95861 308 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 HLA-DQB1P01920 261 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 FCGR3AP08637 254 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 PSMB3P49720 205 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 TMEM50BP56557 158 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 RPS11P62280 158 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLCN3-208ENST00000512813 QRFPP83859 136 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 EBLN2Q6P2I7 272 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 LYPD5Q6UWN5 251 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 ZNF493Q6ZR52 646 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 FAM89BQ8N5H3 189 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 RNASE8Q8TDE3 154 aaKnown RBP6.09□□□□□ -1.43
CLCN3-208ENST00000512813 SMIM19Q96E16 107 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 ARHGAP5-AS1Q96IT6 56 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 LINC00052Q96N35 136 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 PECRQ9BY49 303 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 RAB21Q9UL25 225 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 OR2W1Q9Y3N9 320 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 ICOSQ9Y6W8 199 aa6.09□□□□□ -1.43
CLCN3-208ENST00000512813 ZNF98A6NK75 572 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 OGG1O15527 345 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 HNRNPCP07910 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
CLCN3-208ENST00000512813 CALRP27797 417 aaKnown RBP6.08□□□□□ -1.44
CLCN3-208ENST00000512813 ID1P41134 155 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 ETV6P41212 452 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 TAS2R60P59551 318 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 TBCEQ15813 527 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-208ENST00000512813 DEFB107AQ8IZN7 70 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 COQ8AQ8NI60 647 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 PINX1Q96BK5 328 aaKnown RBP6.08□□□□□ -1.44
CLCN3-208ENST00000512813 TMEM56Q96MV1 263 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 CENPOQ9BU64 300 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 TMPRSS5Q9H3S3 457 aa6.08□□□□□ -1.44
CLCN3-208ENST00000512813 RCL1Q9Y2P8 373 aaKnown RBP6.08□□□□□ -1.44
CLCN3-208ENST00000512813 IGKV1D-13A0A0B4J2D9 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 A0A1W2PPK0 400 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 GAGE12BA1L429 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
CLCN3-208ENST00000512813 M0R2Z0 102 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 GAGE7O76087 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 HPRT1P00492 218 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 GAGE12FP0CL80 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 GAGE12GP0CL81 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 GAGE12IP0CL82 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 IGKV1-13P0DP09 117 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 HOXB6P17509 224 aaKnown RBP6.07□□□□□ -1.44
CLCN3-208ENST00000512813 PRCDQ00LT1 54 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 MS4A2Q01362 244 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 SPINK13Q1W4C9 94 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 KDM4DQ6B0I6 523 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 TMEM144Q7Z5S9 345 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 BAP18Q8IXM2 172 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 SPAG16Q8N0X2 631 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 TMEM256Q8N2U0 113 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 DMBX1Q8NFW5 382 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 TMEM263Q8WUH6 116 aaKnown RBP6.07□□□□□ -1.44
CLCN3-208ENST00000512813 CANT1Q8WVQ1 401 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 MAFIPQ8WZ33 124 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 URM1Q9BTM9 101 aaKnown RBP6.07□□□□□ -1.44
CLCN3-208ENST00000512813 WDR12Q9GZL7 423 aaKnown RBP6.07□□□□□ -1.44
CLCN3-208ENST00000512813 BABAM2Q9NXR7 383 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 DOK5Q9P104 306 aa6.07□□□□□ -1.44
CLCN3-208ENST00000512813 SOCS3O14543 225 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 PLAC9Q5JTB6 97 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 C1orf100Q5SVJ3 147 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 OR11H7Q8NGC8 314 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 TRUB1Q8WWH5 349 aaKnown RBP6.06□□□□□ -1.44
CLCN3-208ENST00000512813 TMEM203Q969S6 136 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 TMEM230Q96A57 120 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 PGLYRP3Q96LB9 341 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 DERL3Q96Q80 235 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 OR51B2Q9Y5P1 312 aa6.06□□□□□ -1.44
CLCN3-208ENST00000512813 A0A0B4J293 547 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 IBA57-AS1B1ANH7 110 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 BUB3O43684 328 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 RLN2P04090 185 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 POLR2IP36954 125 aaKnown RBP6.05□□□□□ -1.44
CLCN3-208ENST00000512813 ST3GAL4Q11206 333 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 MEDAGQ5VYS4 303 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 MORN5Q5VZ52 161 aa6.05□□□□□ -1.44
CLCN3-208ENST00000512813 Q6ZS49 121 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms