RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 HNF4GQ14541 408 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 LDLRAD2Q5SZI1 272 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 MIC13Q5XKP0 118 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 STPG3Q8N7X2 389 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 OR2T10Q8NGZ9 312 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 OR1P1Q8NH06 330 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 RNF2Q99496 336 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 SMCO4Q9NRQ5 59 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 TPSG1Q9NRR2 321 aa10.48□□□□□ -0.73
DEPDC1B-206ENST00000512452 ZFP92A6NM28 416 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 VWC2LB2RUY7 222 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 E7EUB6 86 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 TOX4O94842 621 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 CXorf1O96002 111 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 STAG3L2P0CL84 134 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 STAG3L3P0CL85 134 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 FGF8P55075 233 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 SELENOTP62341 195 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 LCN2P80188 198 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 MEF2BQ02080 365 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 KLRD1Q13241 179 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 TNXAQ16473 311 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 FAM74A3Q4VXF1 159 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 C10orf55Q5SWW7 151 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 CYB561D1Q8N8Q1 229 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 THAP8Q8NA92 274 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 OR1L6Q8NGR2 347 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 C10orf105Q8TEF2 133 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 FAM168AQ92567 244 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 MALSU1Q96EH3 234 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 ARL2-SNX15V9GYD0 113 aa10.47□□□□□ -0.73
DEPDC1B-206ENST00000512452 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.46□□□□□ -0.732e-14■■■■□ 20.7
DEPDC1B-206ENST00000512452 HRNRQ86YZ3 2850 aaPredicted RBP10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 FAM74A7A6NL05 159 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 B4DEV8 164 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 CRYGCP07315 174 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 FBP1P09467 338 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 LINC00869P0C866 280 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 CNTFRP26992 372 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 CLEC2AQ6UVW9 174 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 Q8N6K4 173 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 C22orf15Q8WYQ4 148 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 EAF1Q96JC9 268 aaPredicted RBP10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 NIPSNAP3BQ9BS92 247 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 FBXL15Q9H469 300 aa10.46□□□□□ -0.73
DEPDC1B-206ENST00000512452 A0A087WWC5 75 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 TEX22C9J3V5 150 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 H3BQ15 152 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 M0R036 132 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 OR10J1P30954 320 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 PRB3Q04118 309 aaPredicted RBP10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 PLGLAQ15195 96 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 MMDQ15546 238 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 AWAT1Q58HT5 328 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 FAM90A2PQ658T7 463 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 CYP2G1PQ6ZSU1 146 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 LHFPL4Q7Z7J7 247 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 SSMEM1Q8WWF3 244 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 SRSF12Q8WXF0 261 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 TVP23CQ96ET8 276 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 TBX15Q96SF7 602 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 MRPL32Q9BYC8 188 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMA7Q9Y2S6 64 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 HILPDAQ9Y5L2 63 aa10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 F11RQ9Y624 299 aaKnown RBP10.45□□□□□ -0.74
DEPDC1B-206ENST00000512452 C7orf77A4D0Y5 90 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 PDE6DO43924 150 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 CLN5O75503 358 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 OR5G3P0C626 314 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 BRS3P32247 399 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 PAX8Q06710 450 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 C5orf64Q2M2E5 130 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 GATAD1Q8WUU5 269 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
DEPDC1B-206ENST00000512452 TNCP24821 2201 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 ZANQ9Y493 2812 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 TCRBV4S1A1TA0A5B7 111 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 F6UZH7 168 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 FAM106CPP0CH98 169 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 ATP5J2P56134 94 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 TAS2R45P59539 299 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 CD81P60033 236 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 SSBP2P81877 361 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 DEFA6Q01524 100 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 SSX2Q16385 188 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 GCSAMLQ5JQS6 135 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 PRSS57Q6UWY2 283 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 C15orf54Q8N8G6 183 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 TMEM116Q8NCL8 245 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 OR1L4Q8NGR5 311 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 PFDN5Q99471 154 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 TRGV9Q99603 122 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 FNDC4Q9H6D8 234 aaPredicted RBP10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 TECRQ9NZ01 308 aaKnown RBP10.43□□□□□ -0.74
DEPDC1B-206ENST00000512452 FUT9Q9Y231 359 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms