RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 HNF1AP20823 631 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 SRP14P37108 136 aaKnown RBP6.41□□□□□ -1.38
HTT-209ENST00000512068 B2MP61769 119 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 CX3CL1P78423 397 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 ECSCRQ19T08 205 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 ACSM6Q6P461 480 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 FAM122CQ6P4D5 195 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 SPNS3Q6ZMD2 512 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 TMEM219Q86XT9 240 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 IQCF2Q8IXL9 164 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 WFDC11Q8NEX6 87 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 OR5R1Q8NH85 324 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 TMEM170AQ8WVE7 144 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 FAM103A1Q9BTL3 118 aaKnown RBP6.41□□□□□ -1.38
HTT-209ENST00000512068 TREM1Q9NP99 234 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 ZNF355PQ9NSJ1 428 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 PXMP4Q9Y6I8 212 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 NAV2Q8IVL1 2488 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 DCHS2Q6V1P9 2916 aa6.41□□□□□ -1.38
HTT-209ENST00000512068 PRRC2AP48634 2157 aaKnown RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 IGHV7-81A0A0B4J1V7 117 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 CTXND1A0A1B0GTU2 59 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 MAP1LC3B2A6NCE7 125 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 NPIPB5A8MRT5 1133 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 AGPAT2O15120 278 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 HIST1H1BP16401 226 aaKnown RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 CTRB1P17538 263 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 RPL29P47914 159 aaKnown RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 CDC34P49427 236 aaPredicted RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 RND2P52198 227 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 SCGB2A2Q13296 93 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 GAMTQ14353 236 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 PEA15Q15121 130 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 MRGPRG-AS1Q2M3A8 158 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 KLF17Q5JT82 389 aaPredicted RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 MIC13Q5XKP0 118 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 CTRB2Q6GPI1 263 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 UNQ5815/PRO19632Q6UWF5 114 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 CENPVQ7Z7K6 275 aaPredicted RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 C5orf56Q8N8D9 126 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 AJUBAQ96IF1 538 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 MGST2Q99735 147 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 GGTLC1Q9BX51 225 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 MAP1LC3BQ9GZQ8 125 aa6.4□□□□□ -1.38
HTT-209ENST00000512068 EIF5A2Q9GZV4 153 aaKnown RBP6.4□□□□□ -1.38
HTT-209ENST00000512068 NAV3Q8IVL0 2385 aa6.4□□□□□ -1.39
HTT-209ENST00000512068 A0A1B0GW64 132 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 MFSD2BA6NFX1 497 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 KRBOX1C9JBD0 128 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 OR10J1P30954 320 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 NPBWR1P48145 328 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 FHITP49789 147 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 PPT1P50897 306 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 SELENOTP62341 195 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 RHOBP62745 196 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 DEFB112Q30KQ8 113 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 LCN15Q6UWW0 184 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 RBMS3Q6XE24 437 aaKnown RBP6.39□□□□□ -1.39
HTT-209ENST00000512068 CYP2G1PQ6ZSU1 146 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 KRTAP1-3Q8IUG1 177 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 TTC9CQ8N5M4 171 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 EIF4E3Q8N5X7 224 aaKnown RBP6.39□□□□□ -1.39
HTT-209ENST00000512068 STPG3Q8N7X2 389 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 OR1L4Q8NGR5 311 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 OR2T6Q8NHC8 308 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 SGMS2Q8NHU3 365 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 RNF2Q99496 336 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 C19orf24Q9BVV8 132 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 SLC25A22Q9H936 323 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 RPRMQ9NS64 109 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 RNF114Q9Y508 228 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 RFNGQ9Y644 331 aa6.39□□□□□ -1.39
HTT-209ENST00000512068 ABCA12Q86UK0 2595 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 TRAV30A0A087WSZ9 112 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 IGHV3-21A0A0B4J1V1 117 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 TCRBV4S1A1TA0A5B7 111 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 A6NDX4 124 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 ATP6V0E1O15342 81 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 PAX4O43316 350 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 GNG7O60262 68 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 COX7A2P2O60397 106 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 CRYGCP07315 174 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 MDKP21741 143 aaPredicted RBP6.38□□□□□ -1.39
HTT-209ENST00000512068 ZP3P21754 424 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 TAS2R45P59539 299 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 NDPQ00604 133 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 GUK1Q16774 197 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 Q56UQ5 140 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 TOR2AQ5JU69 321 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 SLC35E3Q7Z769 313 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 S100A7AQ86SG5 101 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 BPIFCQ8NFQ6 507 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 OR5T1Q8NG75 326 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 FAM110DQ8TAY7 271 aaPredicted RBP6.38□□□□□ -1.39
HTT-209ENST00000512068 PFDN5Q99471 154 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 HSPB9Q9BQS6 159 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
HTT-209ENST00000512068 TNFRSF19Q9NS68 423 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms