RNA–Protein interactions for RNA: ENST00000510884.5

NUP54-210, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-210ENST00000510884 Q499Y3 187 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 KLF17Q5JT82 389 aaPredicted RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 VAX1Q5SQQ9 334 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 LEG1Q6P5S2 330 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 HSD11B1LQ7Z5J1 315 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 SLC22A18ASQ8N1D0 253 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 SIGLECL1Q8N7X8 197 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 GNPNAT1Q96EK6 184 aaPredicted RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 S100A16Q96FQ6 103 aaKnown RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 MCEEQ96PE7 176 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 FAM173AQ9BQD7 235 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 ZNF670Q9BS34 389 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 RPP25Q9BUL9 199 aaKnown RBP4.04□□□□□ -1.76
NUP54-210ENST00000510884 REEP1Q9H902 201 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 JPT2Q9H910 190 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 CLCF1Q9UBD9 225 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 KLK11Q9UBX7 282 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 PKIGQ9Y2B9 76 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 INSIG2Q9Y5U4 225 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 LINC00312Q9Y6C7 94 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 NUP210LQ5VU65 1888 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 ZDBF2Q9HCK1 2354 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 ANKRD36CQ5JPF3 1778 aa4.04□□□□□ -1.76
NUP54-210ENST00000510884 SBF1O95248 1867 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 ANKRD31Q8N7Z5 1873 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 FAM236DA0A1B0GTK5 79 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 LOC285095A0A1B0GVY8 99 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 SH2D1BO14796 132 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 GEMIN2O14893 280 aaKnown RBP4.03□□□□□ -1.76
NUP54-210ENST00000510884 GSTZ1O43708 216 aaPredicted RBP4.03□□□□□ -1.76
NUP54-210ENST00000510884 KLF7O75840 302 aaPredicted RBP4.03□□□□□ -1.76
NUP54-210ENST00000510884 SNCGO76070 127 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 NAPSAO96009 420 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 CA1P00915 261 aaPredicted RBP4.03□□□□□ -1.76
NUP54-210ENST00000510884 IGHG1P01857 330 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 MT-ND6P03923 174 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 LINC00869P0C866 280 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 IGLC6P0CF74 106 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 P0DMU3 169 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 FAM231AP0DMU4 169 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 FAM231CP0DMU5 169 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 FAM236CP0DP71 79 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 CPMP14384 443 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 BTCP35070 178 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 OPRK1P41145 380 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 RND3P61587 244 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 IL15RAQ13261 267 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 BVES-AS1Q5T3Y7 98 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 SHISA6Q6ZSJ9 500 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 THAP8Q8NA92 274 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 NUP37Q8NFH4 326 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 OR10AG1Q8NH19 301 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 OR10G6Q8NH81 332 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 CMTM2Q8TAZ6 248 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 CLDN23Q96B33 292 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 TVP23CQ96ET8 276 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 C19orf24Q9BVV8 132 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 C5orf66Q9H5L9 145 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 NAA60Q9H7X0 242 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 EDA2RQ9HAV5 297 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 Q9UF83 564 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 PILRAQ9UKJ1 303 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 KLF12Q9Y4X4 402 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 SPCS1Q9Y6A9 102 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 RGPD8O14715 1765 aaPredicted RBP4.03□□□□□ -1.76
NUP54-210ENST00000510884 RGPD5Q99666 1765 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 BPTFQ12830 3046 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 DCHS1Q96JQ0 3298 aa4.03□□□□□ -1.76
NUP54-210ENST00000510884 CCDC88AQ3V6T2 1871 aa4.03□□□□□ -1.77
NUP54-210ENST00000510884 IGLV3-10A0A075B6K4 115 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 A0A087X0T9 212 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 CCL15-CCL14A0A0B4J2E2 113 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 FAM240AA0A1B0GVK7 77 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 TCRBV9S1A1TA0A576 114 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 IRGMA1A4Y4 181 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 ZNF860A6NHJ4 632 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 GABARAPH6UMI1 98 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 K7EQS6 105 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 CXCL13O43927 109 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 CXorf1O96002 111 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 IGHMP01871 453 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 PGA4P0DJD7 388 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 PGA5P0DJD9 388 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 PPP1CCP36873 323 aaKnown RBP4.02□□□□□ -1.77
NUP54-210ENST00000510884 CCR2P41597 374 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 LPAR6P43657 344 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 LOXL1Q08397 574 aaPredicted RBP4.02□□□□□ -1.77
NUP54-210ENST00000510884 GGTLC2Q14390 218 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 SYT14P1Q58G82 188 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 ZNF542PQ5EBM4 170 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 ZNF880Q6PDB4 577 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 Q71RC1 249 aaPredicted RBP4.02□□□□□ -1.77
NUP54-210ENST00000510884 TCF23Q7RTU1 214 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 PRSS41Q7RTY9 318 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 ZNF550Q7Z398 422 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 SLC25A42Q86VD7 318 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 C17orf64Q86WR6 236 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 C11orf53Q8IXP5 236 aa4.02□□□□□ -1.77
NUP54-210ENST00000510884 C10orf111Q8N326 155 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms