RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 GFERP55789 205 aa2.53□□□□□ -2
NUP54-209ENST00000510569 RHEBQ15382 184 aa2.53□□□□□ -2
NUP54-209ENST00000510569 CCL15Q16663 113 aa2.53□□□□□ -2
NUP54-209ENST00000510569 GLYATQ6IB77 296 aa2.53□□□□□ -2
NUP54-209ENST00000510569 SBSNQ6UWP8 590 aa2.53□□□□□ -2
NUP54-209ENST00000510569 DAZ4Q86SG3 579 aaKnown RBP2.53□□□□□ -2
NUP54-209ENST00000510569 TCTE3Q8IZS6 198 aa2.53□□□□□ -2
NUP54-209ENST00000510569 OR8I2Q8N0Y5 310 aa2.53□□□□□ -2
NUP54-209ENST00000510569 ZIC4Q8N9L1 334 aa2.53□□□□□ -2
NUP54-209ENST00000510569 TMEM229BQ8NBD8 167 aa2.53□□□□□ -2
NUP54-209ENST00000510569 OR5H6Q8NGV6 325 aa2.53□□□□□ -2
NUP54-209ENST00000510569 OR2G3Q8NGZ4 309 aa2.53□□□□□ -2
NUP54-209ENST00000510569 ZNF418Q8TF45 676 aaPredicted RBP2.53□□□□□ -2
NUP54-209ENST00000510569 TP53RKQ96S44 253 aa2.53□□□□□ -2
NUP54-209ENST00000510569 PEBP4Q96S96 227 aa2.53□□□□□ -2
NUP54-209ENST00000510569 SMIM3Q9BZL3 60 aa2.53□□□□□ -2
NUP54-209ENST00000510569 OR2H1Q9GZK4 316 aa2.53□□□□□ -2
NUP54-209ENST00000510569 CST9LQ9H4G1 147 aa2.53□□□□□ -2
NUP54-209ENST00000510569 DAZ1Q9NQZ3 744 aaKnown RBP2.53□□□□□ -2
NUP54-209ENST00000510569 RBFOX1Q9NWB1 397 aaKnown RBP2.53□□□□□ -2
NUP54-209ENST00000510569 ZNF230Q9UIE0 474 aaPredicted RBP2.53□□□□□ -2
NUP54-209ENST00000510569 HIGD1AQ9Y241 93 aa2.53□□□□□ -2
NUP54-209ENST00000510569 KLF13Q9Y2Y9 288 aaPredicted RBP2.53□□□□□ -2
NUP54-209ENST00000510569 MED31Q9Y3C7 131 aa2.53□□□□□ -2
NUP54-209ENST00000510569 UGT2A1Q9Y4X1 527 aa2.53□□□□□ -2
NUP54-209ENST00000510569 HES2Q9Y543 173 aa2.53□□□□□ -2
NUP54-209ENST00000510569 PCYT1BQ9Y5K3 369 aaPredicted RBP2.53□□□□□ -2
NUP54-209ENST00000510569 HEBP2Q9Y5Z4 205 aa2.53□□□□□ -2
NUP54-209ENST00000510569 PXMP4Q9Y6I8 212 aa2.53□□□□□ -2
NUP54-209ENST00000510569 PLXNB2O15031 1838 aa2.53□□□□□ -2
NUP54-209ENST00000510569 GBF1Q92538 1859 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 HTTP42858 3142 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 DNAH12Q6ZR08 3092 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 TRAV8-1A0A0A6YYK1 113 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 TRAV5A0A0B4J249 113 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 IGHV1-69DA0A0B4J2H0 117 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 LOC389332A0A1B0GUA5 103 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 A8MT66 165 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 TMEM250H0YL14 139 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 K7N7A8 449 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 PIRO00625 290 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 RBFOX2O43251 390 aaKnown RBP eCLIP2.52□□□□□ -2.01
NUP54-209ENST00000510569 OR7C2O60412 319 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 SMIM17P0DL12 118 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 HIST1H1BP16401 226 aaKnown RBP2.52□□□□□ -2.01
NUP54-209ENST00000510569 FGF7P21781 194 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 AQP1P29972 269 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 OR10J1P30954 320 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 LPAR6P43657 344 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 GABRA2P47869 451 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 CXCL12P48061 93 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 NCBP2P52298 156 aaKnown RBP eCLIP2.52□□□□□ -2.01
NUP54-209ENST00000510569 TAS2R46P59540 309 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 TAS2R20P59543 309 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 RPS25P62851 125 aaKnown RBP2.52□□□□□ -2.01
NUP54-209ENST00000510569 GNA12Q03113 381 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 ENDOGQ14249 297 aaKnown RBP2.52□□□□□ -2.01
NUP54-209ENST00000510569 MMDQ15546 238 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 ZNF404Q494X3 552 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 CLLU1OSQ5K130 101 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 ATP5L2Q7Z4Y8 100 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 C4orf33Q8N1A6 199 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 KRTCAP2Q8N6L1 136 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 NKAPP1Q8N9T2 125 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 OR52R1Q8NGF1 315 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 OR51T1Q8NGJ9 327 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 OR9G1Q8NH87 305 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 HIST1H2BAQ96A08 127 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 NEURL3Q96EH8 262 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 GABARAPL3Q9BY60 117 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 OR8D2Q9GZM6 311 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 COMMD5Q9GZQ3 224 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 DEFB127Q9H1M4 99 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 EFCAB1Q9HAE3 211 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 EDA2RQ9HAV5 297 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 CACYBPQ9HB71 228 aaKnown RBP2.52□□□□□ -2.01
NUP54-209ENST00000510569 PARP11Q9NR21 331 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 KCNIP2Q9NS61 270 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 RBM12B-AS1Q9P1G2 102 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 ANAPC10Q9UM13 185 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 POMPQ9Y244 141 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 INSIG2Q9Y5U4 225 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 SLC25A15Q9Y619 301 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 NUP205Q92621 2012 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 DOCK4Q8N1I0 1966 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 GREB1Q4ZG55 1949 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 NLRC5Q86WI3 1866 aa2.52□□□□□ -2.01
NUP54-209ENST00000510569 CIB4A0PJX0 185 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 CD300LBA8K4G0 201 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 APODP05090 189 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 PPIBP23284 216 aaKnown RBP2.51□□□□□ -2.01
NUP54-209ENST00000510569 ATP5G3P48201 142 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 GRB2P62993 217 aaKnown RBP2.51□□□□□ -2.01
NUP54-209ENST00000510569 CDK6Q00534 326 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 FABP9Q0Z7S8 132 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 ERCC8Q13216 396 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 DHRS2Q13268 280 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 CST6Q15828 149 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 ZNF181Q2M3W8 571 aa2.51□□□□□ -2.01
NUP54-209ENST00000510569 C6orf99Q4VX62 202 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms