RNA–Protein interactions for RNA: ENST00000509112.1

CALCOCO2-213, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 459 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-213ENST00000509112 RAB3CQ96E17 227 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 GRAMD2BQ96HH9 432 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 ZNF414Q96IQ9 312 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 RNF2Q99496 336 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 GFI1Q99684 422 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 DCUN1D5Q9BTE7 237 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 RHPN1-AS1Q9BWJ2 59 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 VSIRQ9H7M9 311 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 FKBP14Q9NWM8 211 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 C21orf62Q9NYP8 219 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 PSORS1C1Q9UIG5 152 aa3.11□□□□□ -1.91
CALCOCO2-213ENST00000509112 NACAE9PAV3 2078 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 AGRNO00468 2067 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 IGKV2D-30A0A075B6S6 120 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 TRAV14DV4A0A0A6YYC5 116 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 TEX48A0A1B0GUV7 120 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 OR2T8A6NH00 312 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 UPK2O00526 184 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 CTSGP08311 255 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 GIG44P09565 113 aaPredicted RBP3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 NQO2P16083 231 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 NPY1RP25929 384 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 ARPC4P59998 168 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 OXA1LQ15070 435 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 RAB11BQ15907 218 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 C12orf74Q32Q52 190 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 KCTD21Q4G0X4 260 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 C1orf134Q5TEV5 83 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 C19orf35Q6ZS72 473 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 STHQ8IWL8 128 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 VKORC1L1Q8N0U8 176 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 PACRGLQ8N7B6 248 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 MAPKAPK5-AS1Q8N8E1 139 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 GINS3Q9BRX5 216 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 CHRDL1Q9BU40 450 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 MND1Q9BWT6 205 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 COMMD5Q9GZQ3 224 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 NXF2Q9GZY0 626 aaKnown RBP3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 KCNK15Q9H427 330 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 PLGRKTQ9HBL7 147 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 NDUFA4L2Q9NRX3 87 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 TMEM14BQ9NUH8 114 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 COMMD9Q9P000 198 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 LSM2Q9Y333 95 aaKnown RBP3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 F11RQ9Y624 299 aaKnown RBP3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 SELENOKQ9Y6D0 94 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 S4R3C0 116 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 V9GY05 133 aa3.1□□□□□ -1.91
CALCOCO2-213ENST00000509112 TRAV1-2A0A0B4J238 106 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 IGKV1D-13A0A0B4J2D9 117 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 PNMA8CA0A1B0GUJ8 204 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TMEM189A5PLL7 270 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 METTL21EPA6NDL7 271 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 SMIM9A6NGZ8 99 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 K7EIM0 57 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 DEFB4AO15263 64 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 NUPL2O15504 423 aaKnown RBP3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 SCGNO76038 276 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 IFNA10P01566 189 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 IFNA21P01568 189 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 IFNA17P01571 189 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 REG1AP05451 166 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TRAPPC2P0DI81 140 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TRAPPC2BP0DI82 140 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 IGKV1-13P0DP09 117 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 CRHBPP24387 322 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 FGF9P31371 208 aaPredicted RBP3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TALDO1P37837 337 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 WT1-ASQ06250 92 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 GAGE5Q13069 117 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 GAGE6Q13070 117 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 CATR1Q13166 79 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 INSL4Q14641 139 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 RCN1Q15293 331 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 SPHARQ15513 63 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 LAIR2Q6ISS4 152 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 SLC25A24Q6NUK1 477 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 WDR73Q6P4I2 378 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TMEM91Q6ZNR0 172 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TCF24Q7RTU0 167 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 SPAG16Q8N0X2 631 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 OR1L8Q8NGR8 309 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 OR1P1Q8NH06 330 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TCTEX1D2Q8WW35 142 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TMED6Q8WW62 240 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 CYGBQ8WWM9 190 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 BORCS5Q969J3 196 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 LSM10Q969L4 123 aaKnown RBP3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 C20orf24Q9BUV8 137 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 C1QTNF4Q9BXJ3 329 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 MS4A6AQ9H2W1 248 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TMEM231Q9H6L2 316 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 RNF167Q9H6Y7 350 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 FAM212BQ9NTI7 297 aaPredicted RBP3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 TBC1D24Q9ULP9 559 aa3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 AK6Q9Y3D8 172 aaKnown RBP3.09□□□□□ -1.91
CALCOCO2-213ENST00000509112 FAT1Q14517 4588 aa3.09□□□□□ -1.92
CALCOCO2-213ENST00000509112 IGKV1D-8A0A087WSZ0 117 aa3.08□□□□□ -1.92
CALCOCO2-213ENST00000509112 IGHV3-35A0A0C4DH35 117 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms