RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 GPR146Q96CH1 333 aa11.86□□□□□ -0.51
HOXC4-203ENST00000507650 DIRAS2Q96HU8 199 aa11.86□□□□□ -0.51
HOXC4-203ENST00000507650 MAP6D1Q9H9H5 199 aa11.86□□□□□ -0.51
HOXC4-203ENST00000507650 PUS1Q9Y606 427 aaKnown RBP eCLIP11.86□□□□□ -0.51
HOXC4-203ENST00000507650 TEX13DA0A0J9YY54 714 aaPredicted RBP11.85□□□□□ -0.51
HOXC4-203ENST00000507650 GSTZ1O43708 216 aaPredicted RBP11.85□□□□□ -0.51
HOXC4-203ENST00000507650 IGKV1-17P01599 117 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 HOXA1P49639 335 aaPredicted RBP11.85□□□□□ -0.51
HOXC4-203ENST00000507650 TMBIM6P55061 237 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 IL18Q14116 193 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 Q6ZWC4 215 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 GBGT1Q8N5D6 347 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 IL17DQ8TAD2 202 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 CACNG5Q9UF02 275 aa11.85□□□□□ -0.51
HOXC4-203ENST00000507650 KIR2DL5BA0A0G2JN68 375 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 KIR2DL5BA0A0G2JPC4 375 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 SPRY2O43597 315 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 DFFBO76075 338 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 AKAIN1P0CW23 69 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 SNCAP37840 140 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 SUPT4H1P63272 117 aaKnown RBP11.84□□□□□ -0.51
HOXC4-203ENST00000507650 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
HOXC4-203ENST00000507650 ZNF600Q6ZNG1 722 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 TCF24Q7RTU0 167 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 LYG2Q86SG7 212 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 KIR2DL5AQ8N109 375 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 DUSP18Q8NEJ0 188 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 KIR2DL5BQ8NHK3 375 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 RBPMSQ93062 196 aaKnown RBP11.84□□□□□ -0.51
HOXC4-203ENST00000507650 RNF183Q96D59 192 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 TP53TG1Q9Y2A0 90 aa11.84□□□□□ -0.51
HOXC4-203ENST00000507650 CLN5O75503 358 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 NXPH3O95157 252 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 TNFSF8P32971 234 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 RPL5P46777 297 aaKnown RBP11.83□□□□□ -0.52
HOXC4-203ENST00000507650 APOC4P55056 127 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 SPCS3P61009 180 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 TNFRSF9Q07011 255 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 TMEM187Q14656 261 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 TMEM268Q5VZI3 342 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 OR4X1Q8NH49 305 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
HOXC4-203ENST00000507650 GALNT14Q96FL9 552 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 BCL7BQ9BQE9 202 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 C6orf62Q9GZU0 229 aaPredicted RBP11.83□□□□□ -0.52
HOXC4-203ENST00000507650 C14orf166Q9Y224 244 aaKnown RBP11.83□□□□□ -0.52
HOXC4-203ENST00000507650 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
HOXC4-203ENST00000507650 KMT2AQ03164 3969 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 DISC1C4P0D8 188 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 B3GALNT1O75752 331 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 ATG12O94817 140 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 OPRK1P41145 380 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 NPBWR1P48145 328 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 TIGITQ495A1 244 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 FAM219AQ8IW50 185 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 OR52E5Q8NH55 327 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 TRIM63Q969Q1 353 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 PDCD10Q9BUL8 212 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 MS4A6AQ9H2W1 248 aa11.82□□□□□ -0.52
HOXC4-203ENST00000507650 CORTO00230 105 aa11.81□□□□□ -0.52
HOXC4-203ENST00000507650 UBE2CO00762 179 aa11.81□□□□□ -0.52
HOXC4-203ENST00000507650 BMI1P35226 326 aa11.81□□□□□ -0.52
HOXC4-203ENST00000507650 PRSS54Q6PEW0 395 aa11.81□□□□□ -0.52
HOXC4-203ENST00000507650 RNASE11Q8TAA1 199 aaKnown RBP11.81□□□□□ -0.52
HOXC4-203ENST00000507650 GINS3Q9BRX5 216 aa11.81□□□□□ -0.52
HOXC4-203ENST00000507650 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.81□□□□□ -0.52
HOXC4-203ENST00000507650 FRAS1Q86XX4 4008 aa11.81□□□□□ -0.52
HOXC4-203ENST00000507650 IGLC1P0CG04 106 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 CRYBB3P26998 211 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 DHODHQ02127 395 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
HOXC4-203ENST00000507650 C2orf83Q53S99 150 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 NMSQ5H8A3 153 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 LEMD1Q68G75 181 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 PRRT1Q99946 306 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 U3KQE9 123 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 V9GYH0 126 aa11.8□□□□□ -0.52
HOXC4-203ENST00000507650 GIG44P09565 113 aaPredicted RBP11.79□□□□□ -0.52
HOXC4-203ENST00000507650 HTR2BP41595 481 aa11.79□□□□□ -0.52
HOXC4-203ENST00000507650 RND2P52198 227 aa11.79□□□□□ -0.52
HOXC4-203ENST00000507650 SUB1P53999 127 aaKnown RBP eCLIP11.79□□□□□ -0.52
HOXC4-203ENST00000507650 KLF9Q13886 244 aaPredicted RBP11.79□□□□□ -0.52
HOXC4-203ENST00000507650 ZNF79Q15937 498 aa11.79□□□□□ -0.52
HOXC4-203ENST00000507650 STPG3Q8N7X2 389 aa11.79□□□□□ -0.52
HOXC4-203ENST00000507650 ENY2Q9NPA8 101 aa11.79□□□□□ -0.52
HOXC4-203ENST00000507650 K7EQG2 157 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 DEFB131AP59861 70 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 LYZL2Q7Z4W2 148 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 SLC24A4Q8NFF2 622 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 CSTL1Q9H114 145 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 HEYLQ9NQ87 328 aaPredicted RBP11.78□□□□□ -0.52
HOXC4-203ENST00000507650 RABL2AQ9UBK7 228 aaPredicted RBP11.78□□□□□ -0.52
HOXC4-203ENST00000507650 RSL24D1Q9UHA3 163 aaKnown RBP11.78□□□□□ -0.52
HOXC4-203ENST00000507650 RABL2BQ9UNT1 228 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 VPS13DQ5THJ4 4388 aa11.78□□□□□ -0.52
HOXC4-203ENST00000507650 FABP12A6NFH5 140 aa11.77□□□□□ -0.53
HOXC4-203ENST00000507650 JTBO76095 146 aa11.77□□□□□ -0.53
HOXC4-203ENST00000507650 P2RY1P47900 373 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms