RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 RPS11P62280 158 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 PSG7Q13046 419 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 TMEM183BQ1AE95 376 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 RRN3P1Q2M238 152 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 NCMAPQ5T1S8 102 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 C9orf66Q5T8R8 295 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 EBLN2Q6P2I7 272 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 GLIPR1L1Q6UWM5 242 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 KTN1-AS1Q86SY8 53 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 WDR86Q86TI4 376 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 PDPNQ86YL7 162 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 MKXQ8IYA7 352 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 LYG1Q8N1E2 194 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 SVBPQ8N300 66 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 TEX29Q8N6K0 151 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 ZDHHC22Q8N966 263 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 C2orf15Q8WU43 125 aaKnown RBP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 RAB2BQ8WUD1 216 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 KLK6Q92876 244 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 OR4C12Q96R67 309 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 ADAT1Q9BUB4 502 aaKnown RBP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 GGTLC1Q9BX51 225 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 C11orf68Q9H3H3 251 aaKnown RBP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 IER3IP1Q9Y5U9 82 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 NEO1Q92859 1461 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 FAM208AQ9UK61 1670 aaKnown RBP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 NUP205Q92621 2012 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 UBR1Q8IWV7 1749 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 KIAA1551Q9HCM1 1747 aa2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 KDM6AO15550 1401 aaPredicted RBP2.68□□□□□ -1.98
HMGB3P15-201ENST00000507326 SBF1O95248 1867 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 THSD7AQ9UPZ6 1657 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 LOC102724200A0A096LPH7 203 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 IZUMO1RA6ND01 250 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 OR2T8A6NH00 312 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 A8MWL6 223 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 A8MWV9 139 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 H7BYZ3 331 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 J3QQQ9 107 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 UBFD1O14562 309 aaKnown RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 YPEL1O60688 119 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 SERF1AO75920 110 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 KRASP01116 189 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 HLA-DQB1P01920 261 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 ZNF688P0C7X2 276 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 FOLR2P14207 255 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 GATA2P23769 480 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 UBE2AP49459 152 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 DEFA3P59666 94 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 S100A10P60903 97 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 HIST1H4AP62805 103 aaKnown RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 BTG2P78543 158 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 HSD52Q0P140 79 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 ENDOGQ14249 297 aaKnown RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 CCSMST1Q4G0I0 132 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 CASC10Q5T4H9 136 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 HRCT1Q6UXD1 115 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 LINC00305Q7Z4B0 112 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 FAM19A3Q7Z5A8 133 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 SNX29P2Q8IUI4 249 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 C4orf33Q8N1A6 199 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 EXOC3-AS1Q8N2X6 119 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 C9orf62Q8N4C0 152 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 FER1L6-AS1Q8NA97 138 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 OR4K5Q8NGD3 323 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 OR5D14Q8NGL3 314 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 OR4A5Q8NH83 315 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 LCN9Q8WX39 176 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 ZNF689Q96CS4 500 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 GPX7Q96SL4 187 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 ZNF436Q9C0F3 470 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 SLC39A9Q9NUM3 307 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 SNX12Q9UMY4 172 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 FUT9Q9Y231 359 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 SCN2AQ99250 2005 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 MAP2P11137 1827 aaKnown RBP2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 PEAK1Q9H792 1746 aa2.67□□□□□ -1.98
HMGB3P15-201ENST00000507326 CASZ1Q86V15 1759 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 ADAMTSL1Q8N6G6 1762 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 CHD4Q14839 1912 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 RAI1Q7Z5J4 1906 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 COL2A1P02458 1487 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 COL5A2P05997 1499 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 FOCADQ5VW36 1801 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 XRN1Q8IZH2 1706 aaKnown RBP2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 CRYBG1Q9Y4K1 1723 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 IGLV1-50A0A075B6I6 118 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 CCL15-CCL14A0A0B4J2E2 113 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 IGHV3-16A0A0C4DH30 117 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 IGHV1-58A0A0C4DH39 117 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 A0A1B0GW64 132 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 RPL37AP8A6NKH3 93 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 ZNF670-ZNF695F2Z2N8 137 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 TAX1BP3O14907 124 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 CCL25O15444 150 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 TNFP01375 233 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 PMP2P02689 132 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 LINC00869P0C866 280 aa2.66□□□□□ -1.98
HMGB3P15-201ENST00000507326 IGLC6P0CF74 106 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms