RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 IGKV1D-13A0A0B4J2D9 117 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 ZNF701M0R085 212 aaPredicted RBP4.86□□□□□ -1.63
VCAN-207ENST00000507162 PSCAO43653 123 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 SLC22A5O76082 557 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 NXPH4O95158 308 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 IGLV2-14P01704 120 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 CDK1P06493 297 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 H2AFB1P0C5Y9 115 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 H2AFB2P0C5Z0 115 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 IGKV1-13P0DP09 117 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 AZU1P20160 251 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 NKX2-1P43699 371 aaPredicted RBP4.86□□□□□ -1.63
VCAN-207ENST00000507162 NPBWR1P48145 328 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 ETV1P50549 477 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 QRFPP83859 136 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 P2RY14Q15391 338 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 PLAC9Q5JTB6 97 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 LELP1Q5T871 98 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 THOC7Q6I9Y2 204 aaKnown RBP4.86□□□□□ -1.63
VCAN-207ENST00000507162 KRTAP5-3Q6L8H2 238 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 FAM89BQ8N5H3 189 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 OR1P1Q8NH06 330 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 PGLYRP3Q96LB9 341 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 C16orf92Q96LL3 132 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 GABARAPL3Q9BY60 117 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 FAM107BQ9H098 131 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 DCSTAMPQ9H295 470 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 NDUFA4L2Q9NRX3 87 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 MSRB1Q9NZV6 116 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 NSG2Q9Y328 171 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 OR2W1Q9Y3N9 320 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 OR51B2Q9Y5P1 312 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 MUC2Q02817 5179 aa4.86□□□□□ -1.63
VCAN-207ENST00000507162 A0A075B6Q4 140 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 IGKV1D-8A0A087WSZ0 117 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 DBX1A6NMT0 343 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 SULT1C2O00338 296 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 TMEM50AO95807 157 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 LALBAP00709 142 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 IGLV2-8P01709 118 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 HLA-DQB1P01920 261 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 HTN1P15515 57 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 NQO2P16083 231 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 PAX9P55771 341 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 TAS2R31P59538 309 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 ST3GAL4Q11206 333 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 ZIK1Q3SY52 487 aaPredicted RBP4.85□□□□□ -1.63
VCAN-207ENST00000507162 CT83Q5H943 113 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 C1orf100Q5SVJ3 147 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 SCXQ7RTU7 201 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 AMIGO2Q86SJ2 522 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 TPRA1Q86W33 373 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 TMEM56Q96MV1 263 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 ABHD1Q96SE0 405 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 WDR12Q9GZL7 423 aaKnown RBP4.85□□□□□ -1.63
VCAN-207ENST00000507162 SAV1Q9H4B6 383 aaPredicted RBP4.85□□□□□ -1.63
VCAN-207ENST00000507162 DNAJC4Q9NNZ3 241 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 NRN1Q9NPD7 142 aa4.85□□□□□ -1.63
VCAN-207ENST00000507162 SAC3D1A6NKF1 404 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 FOXI3A8MTJ6 420 aaPredicted RBP4.84□□□□□ -1.63
VCAN-207ENST00000507162 F6UB75 175 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 MFNGO00587 321 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 DENRO43583 198 aaKnown RBP4.84□□□□□ -1.63
VCAN-207ENST00000507162 SNAPC5O75971 98 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 DIRAS3O95661 229 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 HPRT1P00492 218 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 TALDO1P37837 337 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 RORCP51449 518 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.63
VCAN-207ENST00000507162 EIF4EBP1Q13541 118 aaPredicted RBP4.84□□□□□ -1.63
VCAN-207ENST00000507162 FAM78BQ5VT40 261 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 EBLN2Q6P2I7 272 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 C16orf54Q6UWD8 224 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 FOXI2Q6ZQN5 318 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 CMTM1Q8IZ96 169 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 OR56B1Q8NGI3 324 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 OR13F1Q8NGS4 319 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 OR10J6PQ8NGY7 276 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 IGF2BP2-AS1Q96M15 143 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 GABARAPL1Q9H0R8 117 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 SEPSECSQ9HD40 501 aaKnown RBP4.84□□□□□ -1.63
VCAN-207ENST00000507162 NOP10Q9NPE3 64 aaKnown RBP4.84□□□□□ -1.63
VCAN-207ENST00000507162 KCNK7Q9Y2U2 307 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.63
VCAN-207ENST00000507162 A0A096LPF7 62 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 TCRBV3S1A0A5B6 114 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 PLAC8L1A1L4L8 177 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 LRCOL1A6NCL2 159 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 HNRNPCP07910 306 aaKnown RBP eCLIP4.83□□□□□ -1.64
VCAN-207ENST00000507162 CLEC2LP0C7M8 214 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 HOXA5P20719 270 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 ID1P41134 155 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 RPL37AP61513 92 aaKnown RBP4.83□□□□□ -1.64
VCAN-207ENST00000507162 ERVK-16P61578 105 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 FLOT2Q14254 428 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 INSL4Q14641 139 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 Q6ZSA8 131 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 TMED4Q7Z7H5 227 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 Q8N814 137 aa4.83□□□□□ -1.64
VCAN-207ENST00000507162 COQ8AQ8NI60 647 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms