RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 HIST1H1EP10412 219 aaKnown RBP13.93□□□□□ -0.18
SQSTM1-211ENST00000506690 HINT2Q9BX68 163 aa13.93□□□□□ -0.18
SQSTM1-211ENST00000506690 NCOR1P1Q9H4R4 102 aa13.93□□□□□ -0.18
SQSTM1-211ENST00000506690 DMDP11532 3685 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 TRAV5A0A0B4J249 113 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 LEPROTL1O95214 131 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 PRDX2P32119 198 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 LPAL2Q16609 132 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 SSX8Q7RTT4 187 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 OR9G1Q8NH87 305 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 TMEM191AQ9H0A3 160 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 TRAV8-6A0A0B4J262 113 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 PEX7O00628 323 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 ZNF329Q86UD4 541 aa13.92□□□□□ -0.18
SQSTM1-211ENST00000506690 HSBP1L1C9JCN9 74 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 PRCDQ00LT1 54 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 HIST1H1AQ02539 215 aaPredicted RBP13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 POU2AF1Q16633 256 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 ZNF257Q9Y2Q1 563 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 HBBP68871 147 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 UTF1Q5T230 341 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 SMIM12Q96EX1 92 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 MS4A6AQ9H2W1 248 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 PEF1Q9UBV8 284 aaKnown RBP13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 CELSR3Q9NYQ7 3312 aa13.91□□□□□ -0.18
SQSTM1-211ENST00000506690 CER1O95813 267 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 C2orf83Q53S99 150 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 ZNF841Q6ZN19 808 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 PRNDQ9UKY0 176 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 TECTAO75443 2155 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 IGLC1P0CG04 106 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 FOXA3P55318 350 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 ATP5IP56385 69 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 MLANAQ16655 118 aa13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 PEAR1Q5VY43 1037 aaPredicted RBP13.9□□□□□ -0.18
SQSTM1-211ENST00000506690 NBEAQ8NFP9 2946 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 TMEM238C9JI98 176 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 DUSP3P51452 185 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 PET117Q6UWS5 81 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 CT55Q8WUE5 264 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 IGKV1D-17A0A075B6S4 117 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 A0A087X0K7 114 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 OR5AL1P0C617 328 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 SP9P0CG40 484 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 SAA2P0DJI9 122 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 PYYP10082 97 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 S100A7P31151 101 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 PRR31Q5SQ13 230 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 LRRC29Q8WV35 223 aa13.89□□□□□ -0.19
SQSTM1-211ENST00000506690 ZDBF2Q9HCK1 2354 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 MGST3O14880 152 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 CD69Q07108 199 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 CT45A1Q5HYN5 189 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 CT45A3Q8NHU0 189 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 ZNF714Q96N38 554 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 TNCP24821 2201 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 LIPFP07098 398 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 IGHV1-2P23083 117 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 ABHD17BQ5VST6 288 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 VHLLQ6RSH7 139 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 TCF24Q7RTU0 167 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 OR1L8Q8NGR8 309 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 H1FXQ92522 213 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 LEAP2Q969E1 77 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 PAXXQ9BUH6 204 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 MAP1LC3CQ9BXW4 147 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 MEGF9Q9H1U4 602 aa13.88□□□□□ -0.19
SQSTM1-211ENST00000506690 UPK2O00526 184 aa13.87□□□□□ -0.19
SQSTM1-211ENST00000506690 RNASE2P10153 161 aaKnown RBP13.87□□□□□ -0.19
SQSTM1-211ENST00000506690 CD24P25063 80 aa13.87□□□□□ -0.19
SQSTM1-211ENST00000506690 GPR183P32249 361 aa13.87□□□□□ -0.19
SQSTM1-211ENST00000506690 RNFT1Q5M7Z0 435 aa13.87□□□□□ -0.19
SQSTM1-211ENST00000506690 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-211ENST00000506690 TIMM8AO60220 97 aaPredicted RBP13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 MYCNOSP40205 109 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 TMEM105Q8N8V8 129 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 SARAFQ96BY9 339 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 PRSS22Q9GZN4 317 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 CALYQ9NYX4 217 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 TEX50A0A1B0GTY4 177 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 CGB3P0DN86 165 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 CGB7P0DN87 165 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 INO80CQ6PI98 192 aaPredicted RBP13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 C2orf91Q6ZV80 131 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 GTSF1Q8WW33 167 aa13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 KLF13Q9Y2Y9 288 aaPredicted RBP13.86□□□□□ -0.19
SQSTM1-211ENST00000506690 C7orf71A4D174 169 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 UFSP1Q6NVU6 142 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 FXYD5Q96DB9 178 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 ADTRPQ96IZ2 230 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 NDFIP1Q9BT67 221 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 RPP21Q9H633 154 aaKnown RBP13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 WDFY4Q6ZS81 3184 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 LOC102724200A0A096LPH7 203 aaPredicted RBP13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 SAP30O75446 220 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 LYZL6O75951 148 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 COX8AP10176 69 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 CT83Q5H943 113 aa13.85□□□□□ -0.19
SQSTM1-211ENST00000506690 LINC01545Q5VT33 79 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms