RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 BAK1Q16611 211 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 ANKRD55Q3KP44 614 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 NMSQ5H8A3 153 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 OR52B4Q8NGK2 314 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 TM2D3Q9BRN9 247 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 STAB2Q8WWQ8 2551 aa11.67□□□□□ -0.54
MED28-204ENST00000506409 CCR6P51684 374 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 RBMS2Q15434 407 aaKnown RBP11.66□□□□□ -0.54
MED28-204ENST00000506409 DEFB125Q8N687 156 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 SLC24A4Q8NFF2 622 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 OR10C1Q96KK4 312 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 HIPK2Q9H2X6 1198 aa11.66□□□□□ -0.54
MED28-204ENST00000506409 FNDC4Q9H6D8 234 aaPredicted RBP11.66□□□□□ -0.54
MED28-204ENST00000506409 TNFRSF9Q07011 255 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 HAGHQ16775 308 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 C2orf83Q53S99 150 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 LAMTOR1Q6IAA8 161 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 CENPSQ8N2Z9 138 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.54
MED28-204ENST00000506409 SRD5A3Q9H8P0 318 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 SMPXQ9UHP9 88 aa11.65□□□□□ -0.54
MED28-204ENST00000506409 HUWE1Q7Z6Z7 4374 aaKnown RBP11.64□□□□□ -0.55
MED28-204ENST00000506409 TRAV14DV4A0A0A6YYC5 116 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 IGHV7-4-1A0A0J9YVY3 117 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 DUXBA0A1W2PPF3 345 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 RPS10-NUDT3A0A1W2PQS6 291 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 NAP1L6A6NFF2 107 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 TSPAN4O14817 238 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 CLN5O75503 358 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 TMEM50AO95807 157 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 PPP1R1AQ13522 171 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 MLANAQ16655 118 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 TOMM20LQ6UXN7 152 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 ZNF600Q6ZNG1 722 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 TMEM116Q8NCL8 245 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 OR1S1Q8NH92 325 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 RNASEH2CQ8TDP1 164 aaKnown RBP11.64□□□□□ -0.55
MED28-204ENST00000506409 SDHCQ99643 169 aaPredicted RBP11.64□□□□□ -0.55
MED28-204ENST00000506409 SPATA25Q9BR10 227 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 GINS3Q9BRX5 216 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 RHPN1-AS1Q9BWJ2 59 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 MRPL36Q9P0J6 103 aaKnown RBP11.64□□□□□ -0.55
MED28-204ENST00000506409 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
MED28-204ENST00000506409 IGHV3-49A0A0A0MS15 119 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 A0A1B0GU03 582 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 LINC00854A0A1B0GVQ3 168 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 SFT2D2O95562 160 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 NPY1RP25929 384 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 LINC00322Q6ZN03 302 aaPredicted RBP11.63□□□□□ -0.55
MED28-204ENST00000506409 NOXA1Q86UR1 476 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 PUS1Q9Y606 427 aaKnown RBP eCLIP11.63□□□□□ -0.55
MED28-204ENST00000506409 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
MED28-204ENST00000506409 RBMY1BA6NDE4 496 aaKnown RBP11.62□□□□□ -0.55
MED28-204ENST00000506409 RBMY1EA6NEQ0 496 aaKnown RBP11.62□□□□□ -0.55
MED28-204ENST00000506409 CENPXA8MT69 81 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 CHEK1O14757 476 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 IFNA10P01566 189 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 RBMY1DP0C7P1 496 aaKnown RBP11.62□□□□□ -0.55
MED28-204ENST00000506409 LRTM2Q8N967 370 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 TMEM170AQ8WVE7 144 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 RNF2Q99496 336 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 RBKSQ9H477 322 aa11.62□□□□□ -0.55
MED28-204ENST00000506409 IGHV3OR16-13A0A075B7E8 117 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 IGHV3-74A0A0B4J1X5 117 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 NDUFB6O95139 128 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 SLC25A4P12235 298 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 IL7P13232 177 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 BMI1P35226 326 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 UBE2MP61081 183 aaKnown RBP11.61□□□□□ -0.55
MED28-204ENST00000506409 ETFRF1Q6IPR1 90 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 PRSS54Q6PEW0 395 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 ZFAND3Q9H8U3 227 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 TMED3Q9Y3Q3 217 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 U3KQ87 197 aa11.61□□□□□ -0.55
MED28-204ENST00000506409 TRAV30A0A087WSZ9 112 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 OR4C46A6NHA9 309 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 PITX3O75364 302 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 SLC25A6P12236 298 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 RND2P52198 227 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 C7orf50Q9BRJ6 194 aaKnown RBP11.6□□□□□ -0.55
MED28-204ENST00000506409 UBQLN2Q9UHD9 624 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 FLVCR2Q9UPI3 526 aa11.6□□□□□ -0.55
MED28-204ENST00000506409 C9orf170A2RU37 121 aa11.59□□□□□ -0.55
MED28-204ENST00000506409 IGKV1-17P01599 117 aa11.59□□□□□ -0.55
MED28-204ENST00000506409 HOXB5P09067 269 aa11.59□□□□□ -0.55
MED28-204ENST00000506409 BTCP35070 178 aa11.59□□□□□ -0.55
MED28-204ENST00000506409 TIGITQ495A1 244 aa11.59□□□□□ -0.55
MED28-204ENST00000506409 ST8SIA2Q92186 375 aa11.59□□□□□ -0.55
MED28-204ENST00000506409 IGKV3-7A0A075B6H7 116 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 FAM90A26D6RGX4 464 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 APOHP02749 345 aaPredicted RBP11.58□□□□□ -0.56
MED28-204ENST00000506409 IFNA4P05014 189 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 CD5P06127 495 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms