RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 DEFA5Q01523 94 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 FXYD3Q14802 87 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 MLANAQ16655 118 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 MIC13Q5XKP0 118 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 ZNF562Q6V9R5 426 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 THAP8Q8NA92 274 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 RAB24Q969Q5 203 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 SMR3AQ99954 134 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 C19orf24Q9BVV8 132 aa6.41□□□□□ -1.38
COL4A5-208ENST00000505728 F11RQ9Y624 299 aaKnown RBP6.41□□□□□ -1.38
COL4A5-208ENST00000505728 LOC102723971A0A1B0GUV8 181 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 NCBP2LA6PVI3 153 aaKnown RBP6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SNAPINO95295 136 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SRP19P09132 144 aaKnown RBP6.4□□□□□ -1.38
COL4A5-208ENST00000505728 AREGP15514 252 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 CTRB1P17538 263 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 ADCYAP1P18509 176 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 OR10J1P30954 320 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SAA4P35542 130 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 PSMB3P49720 205 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SELENOTP62341 195 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 RHOBP62745 196 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SSBP2P81877 361 aaPredicted RBP6.4□□□□□ -1.38
COL4A5-208ENST00000505728 LOXL1Q08397 574 aaPredicted RBP6.4□□□□□ -1.38
COL4A5-208ENST00000505728 ICAM4Q14773 271 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 HAGHQ16775 308 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 DEFB113Q30KQ7 82 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 CTRB2Q6GPI1 263 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SSX7Q7RTT5 188 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SLC35E3Q7Z769 313 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 KRTAP1-3Q8IUG1 177 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 STPG3Q8N7X2 389 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 Q8N9W7 124 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 LINC01356Q8N9X3 169 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 WFDC11Q8NEX6 87 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 OR2T6Q8NHC8 308 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 NANPQ8TBE9 248 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 RXFP4Q8TDU9 374 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 ABHD5Q8WTS1 349 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 C17orf50Q8WW18 174 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 C22orf15Q8WYQ4 148 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 MBD6Q96DN6 1003 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 RNF2Q99496 336 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 RARRES2Q99969 163 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 FNDC4Q9H6D8 234 aaPredicted RBP6.4□□□□□ -1.38
COL4A5-208ENST00000505728 SLC25A22Q9H936 323 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 MANBALQ9NQG1 85 aa6.4□□□□□ -1.38
COL4A5-208ENST00000505728 COL6A5A8TX70 2615 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 ANK3Q12955 4377 aaKnown RBP6.39□□□□□ -1.39
COL4A5-208ENST00000505728 MXRA5Q9NR99 2828 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 A0A096LNT2 108 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 TCRBV4S1A1TA0A5B7 111 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 NPIPB5A8MRT5 1133 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 J3QLI3 93 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 MT-CO2P00403 227 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 HLA-DRB1P01911 266 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 REG1AP05451 166 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 STAG3L2P0CL84 134 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 STAG3L3P0CL85 134 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 BCL2P10415 239 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 CD24P25063 80 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 FGF8P55075 233 aaPredicted RBP6.39□□□□□ -1.39
COL4A5-208ENST00000505728 BPIFB3P59826 476 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 CX3CL1P78423 397 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 SOHLH1Q5JUK2 328 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 PRSS57Q6UWY2 283 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 CYP2G1PQ6ZSU1 146 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 Q71RC1 249 aaPredicted RBP6.39□□□□□ -1.39
COL4A5-208ENST00000505728 TTC9CQ8N5M4 171 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 TMEM116Q8NCL8 245 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 SSMEM1Q8WWF3 244 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 NPIPB3Q92617 1050 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 MISP3Q96FF7 219 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 TRGV9Q99603 122 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 RASL11BQ9BPW5 248 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 NKX6-2Q9C056 277 aaPredicted RBP6.39□□□□□ -1.39
COL4A5-208ENST00000505728 WNT10AQ9GZT5 417 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 C7orf69Q9H7B7 122 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 VAX2Q9UIW0 290 aa6.39□□□□□ -1.39
COL4A5-208ENST00000505728 ATRQ13535 2644 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 IGKV1OR2-108A0A075B7D4 117 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 ZFP92A6NM28 416 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 SCO1O75880 301 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 CXorf1O96002 111 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 FBP1P09467 338 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 FOSL1P15407 271 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 PAX6P26367 422 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 RND2P52198 227 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 MFAP2P55001 183 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 GUCA2BQ16661 112 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 FAM120AOSQ5T036 256 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 OR1L4Q8NGR5 311 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 GATAD1Q8WUU5 269 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 ARPC1AQ92747 370 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 ACY3Q96HD9 319 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 TMEM68Q96MH6 324 aa6.38□□□□□ -1.39
COL4A5-208ENST00000505728 TXNDC17Q9BRA2 123 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms