RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 C1orf159Q96HA4 380 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 NPVFQ9HCQ7 196 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 TNFRSF12AQ9NP84 129 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 COL24A1Q17RW2 1714 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 TNFRSF6BO95407 300 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 SAA4P35542 130 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 COX14Q96I36 57 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 TCRBV3S1A0A5B6 114 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 GGTLC3B5MD39 225 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 GAGE2EQ4V326 116 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 PEF1Q9UBV8 284 aaKnown RBP4.33□□□□□ -1.72
MATR3-211ENST00000505625 GAGE2DQ9UEU5 116 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 DYSFO75923 2080 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 ADRB1P08588 477 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 DLEU7Q6UYE1 221 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 SLC25A38Q96DW6 304 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 RHODO00212 210 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 GALP22466 123 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 FOXL1Q12952 345 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 IBA57Q5T440 356 aaKnown RBP4.33□□□□□ -1.72
MATR3-211ENST00000505625 KLK9Q9UKQ9 250 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 ZGRF1Q86YA3 2104 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 IGHV4-28A0A0C4DH34 117 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 CLDN34H7C241 214 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 IGKV1-39P01597 117 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 IGKV1D-39P04432 117 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 P2RY1P47900 373 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 GAGE2BQ13066 116 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 LYZL2Q7Z4W2 148 aa4.33□□□□□ -1.72
MATR3-211ENST00000505625 FREM3P0C091 2139 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 IGHV3-38A0A0C4DH36 116 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 CD5LO43866 347 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 TMEM127O75204 238 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 MST1LQ2TV78 715 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 C15orf32Q32M92 178 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 BIVMQ86UB2 503 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 VN1R17PQ8TDU5 208 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 NLRC5Q86WI3 1866 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 IGHV1-18A0A0C4DH31 117 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 A0A1B0GUS0 222 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 RPS20P60866 119 aaKnown RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 TMEM174Q8WUU8 243 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 BAALCQ8WXS3 180 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 FAM110AQ9BQ89 295 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 TMEM30AQ9NV96 361 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 IGKV2-40A0A087WW87 121 aaPredicted RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 TRDV1A0A1B0GX56 115 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 TMEM250H0YL14 139 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 IGKV2D-40P01614 121 aaPredicted RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 LYL1P12980 280 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 RPL36AP83881 106 aaKnown RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 PRCDQ00LT1 54 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 EIF4EBP2Q13542 120 aaPredicted RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 IGFL4Q6B9Z1 124 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 CYP2G1PQ6ZSU1 146 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 CELF2-AS1Q8N7Q2 184 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 OR8D4Q8NGM9 314 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 PIFOQ8TCI5 191 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 RPL36ALQ969Q0 106 aaKnown RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 GGTLC1Q9BX51 225 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 ELF5Q9UKW6 265 aaPredicted RBP4.32□□□□□ -1.72
MATR3-211ENST00000505625 PRO1933Q9H354 126 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 PFN2P35080 140 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 RIMKLAQ8IXN7 391 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 RNF182Q8N6D2 247 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 IL17DQ8TAD2 202 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 NPCDR1Q9BY65 106 aa4.32□□□□□ -1.72
MATR3-211ENST00000505625 NPIPB8E9PQR5 432 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 NPIPB9F8W1W9 429 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 NPIPB7O75200 414 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 GP9P14770 177 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 EGR4Q05215 589 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.31□□□□□ -1.72
MATR3-211ENST00000505625 ORMDL3Q8N138 153 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 Q9N2K0 584 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 PARP14Q460N5 1801 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 A0A087WWL8 130 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 VWC2LB2RUY7 222 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 SFT2D2O95562 160 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 ODF1Q14990 250 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 CD300EQ496F6 205 aaPredicted RBP4.31□□□□□ -1.72
MATR3-211ENST00000505625 C8orf86Q6ZUL3 223 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 WFDC11Q8NEX6 87 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 RARRES2Q99969 163 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 DUSP21Q9H596 190 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.31□□□□□ -1.725e-8■■■■■ 30.6
MATR3-211ENST00000505625 TRAV12-2A0A075B6T6 113 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 FOXS1O43638 330 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 PLPP2O43688 288 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 TMEM50AO95807 157 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 IGKV1D-16P01601 117 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 KLF5Q13887 457 aaPredicted RBP4.31□□□□□ -1.72
MATR3-211ENST00000505625 VN1R4Q7Z5H5 301 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 TM2D2Q9BX73 214 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 FUT9Q9Y231 359 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 PAM16Q9Y3D7 125 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 BUB3O43684 328 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 DKK1O94907 266 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 NXPH4O95158 308 aa4.31□□□□□ -1.72
MATR3-211ENST00000505625 CRHP06850 196 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms