RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TRDV1A0A1B0GX56 115 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 SCO2A0A1W2PP80 73 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 A0A1W2PS18 150 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 NOTOA8MTQ0 251 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 SPART-AS1P0CW21 52 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 NPBWR1P48145 328 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 PPP5CP53041 499 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 FXYD7P58549 80 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 DHRS2Q13268 280 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 PHLDA2Q53GA4 152 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 CDPF1Q6NVV7 123 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 ZNF367Q7RTV3 350 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 OR4A16Q8NH70 328 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 BORCS5Q969J3 196 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 GRAMD2BQ96HH9 432 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 NARS2Q96I59 477 aaKnown RBP4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 CNBD2Q96M20 576 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 RAB40CQ96S21 281 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 TSC22D3Q99576 134 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 NDUFB11Q9NX14 153 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 TMED3Q9Y3Q3 217 aa4.92□□□□□ -1.62
NPIPB3-203ENST00000504841 HELTA6NFD8 242 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 IGKV3-20P01619 116 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 GABARAPL2P60520 117 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 NUTF2P61970 127 aaKnown RBP4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 ERHP84090 104 aaKnown RBP4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 PRCDQ00LT1 54 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 ID3Q02535 119 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 TBCEQ15813 527 aaPredicted RBP4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 IZUMO4Q1ZYL8 232 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 FAM222AQ5U5X8 452 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 H2BFWTQ7Z2G1 175 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 CMTM1Q8IZ96 169 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 Q8N1X5 172 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 Q8N3U1 123 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 ZNF114Q8NC26 417 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 OR5AP2Q8NGF4 316 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 OR5H6Q8NGV6 325 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 DCANP1Q8TF63 244 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 TMEM230Q96A57 120 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 MRGPRFQ96AM1 343 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 ATG101Q9BSB4 218 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 ZNF2Q9BSG1 426 aaPredicted RBP4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 C1QTNF4Q9BXJ3 329 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 FXYD6Q9H0Q3 95 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 IFT46Q9NQC8 304 aa4.91□□□□□ -1.62
NPIPB3-203ENST00000504841 NACAE9PAV3 2078 aa4.9□□□□□ -1.62
NPIPB3-203ENST00000504841 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.62
NPIPB3-203ENST00000504841 GPR31O00270 319 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 TMEM50AO95807 157 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 PMP2P02689 132 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 CLEC2LP0C7M8 214 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 FGF9P31371 208 aaPredicted RBP4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 SNCAP37840 140 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 OPRK1P41145 380 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 RFX2P48378 723 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 EIF2B2P49770 351 aaKnown RBP4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 DEFB1P60022 68 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 MXD1Q05195 221 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 SFXN4Q6P4A7 337 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 TMEM88Q6PEY1 159 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 SLC35G3Q8N808 338 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 OR5H2Q8NGV7 314 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 FCGR1BQ92637 280 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 SLC25A38Q96DW6 304 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 NIPSNAP3BQ9BS92 247 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 AUNIPQ9H7T9 357 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 MRPL36Q9P0J6 103 aaKnown RBP4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 DKK2Q9UBU2 259 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 FAT2Q9NYQ8 4349 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 DYNC1H1Q14204 4646 aaKnown RBP4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 DNAH2Q9P225 4427 aa4.9□□□□□ -1.63
NPIPB3-203ENST00000504841 TMEM189A5PLL7 270 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 FAM90A26D6RGX4 464 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 H3BMM0 161 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 CLN5O75503 358 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 SCGB2A1O75556 95 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 CRYBB3P26998 211 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 PSMB9P28065 219 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 CBX5P45973 191 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 HOXA1P49639 335 aaPredicted RBP4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 HSPE1P61604 102 aaKnown RBP4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 SNRPD3P62318 126 aaKnown RBP4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 MLANAQ16655 118 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 TIGITQ495A1 244 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 RNF212Q495C1 297 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 KCTD21Q4G0X4 260 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 IDNKQ5T6J7 187 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 ZNF705AQ6ZN79 300 aaPredicted RBP4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 SPATA12Q7Z6I5 190 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 TBC1D26Q86UD7 250 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 C6orf223Q8N319 242 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 FAM210BQ96KR6 192 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 RNF167Q9H6Y7 350 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 DIABLOQ9NR28 239 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 TXNL4BQ9NX01 149 aaKnown RBP4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 YTHDF2Q9Y5A9 579 aaKnown RBP4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 RFNGQ9Y644 331 aa4.89□□□□□ -1.63
NPIPB3-203ENST00000504841 NBDYA0A0U1RRE5 68 aa4.88□□□□□ -1.63
NPIPB3-203ENST00000504841 TEX48A0A1B0GUV7 120 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms