RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 C15orf62A8K5M9 175 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 PPP5D1E7EU14 171 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 F8W735 103 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 MBPP02686 304 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 IAPPP10997 89 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 GPR183P32249 361 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 ARL3P36405 182 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 RPP30P78346 268 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 KLF5Q13887 457 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 SPSB3Q6PJ21 355 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 RCC1LQ96I51 464 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 SMIM8Q96KF7 97 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 RAB40CQ96S21 281 aa9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 MCRIP2Q9BUT9 160 aaKnown RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 FNDC4Q9H6D8 234 aaPredicted RBP9.13□□□□□ -0.95
PDLIM5-208ENST00000504489 GOSR2O14653 212 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 OVOL1O14753 267 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 TGOLN2O43493 480 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 SSNA1O43805 119 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 SSSCA1O60232 199 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 SCGB1D2O95969 90 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 SLC25A4P12235 298 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 OPRK1P41145 380 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 PAX9P55771 341 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 TAS2R30P59541 319 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 RAB11AP62491 216 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 CYCSP99999 105 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 RPEL1Q2QD12 228 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 ETFRF1Q6IPR1 90 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 GPHB5Q86YW7 130 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 BSCL2Q96G97 398 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 NMES1Q9C002 83 aa9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 RCL1Q9Y2P8 373 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-208ENST00000504489 OR2T8A6NH00 312 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 K7EPK0 472 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 OR2C1O95371 312 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 TMEM50AO95807 157 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 IGHV3-48P01763 117 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 IFNA4P05014 189 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 CTSGP08311 255 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 NPBWR1P48145 328 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 CD69Q07108 199 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 MLANAQ16655 118 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 Q56UQ5 140 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 SPANXN5Q5MJ07 72 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 ACSM6Q6P461 480 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 C1QL4Q86Z23 238 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 OR4X1Q8NH49 305 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 OR4C12Q96R67 309 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 PSENENQ9NZ42 101 aa9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 STRAPQ9Y3F4 350 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-208ENST00000504489 LGALS9O00182 355 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 NUPL2O15504 423 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 GNG7O60262 68 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 TSC22D2O75157 780 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 SIX6O95475 246 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 IGLL1P15814 213 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 ADMP35318 185 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 GPX4P36969 197 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 H2BFSP57053 126 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 SYNJ2BPP57105 145 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 FAM106AQ4KMX7 169 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 UBAC2Q8NBM4 344 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 TMEM116Q8NCL8 245 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 CACNG8Q8WXS5 425 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 CHRDL1Q9BU40 450 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 GPR61Q9BZJ8 451 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 ZNF436Q9C0F3 470 aaPredicted RBP9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 C11orf1Q9H5F2 150 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 MRPL36Q9P0J6 103 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 MGAT4CQ9UBM8 478 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
PDLIM5-208ENST00000504489 NBEAL1Q6ZS30 2694 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 SEC14L6B5MCN3 397 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 PRSS46E5RG02 174 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 H3BP45 60 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 L7N2F9 121 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 CLN5O75503 358 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 PVALBP20472 110 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 INSL3P51460 131 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 VAMP2P63027 116 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 RAB32Q13637 225 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 C9orf66Q5T8R8 295 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 PRSS54Q6PEW0 395 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 TMEM14EPQ6UXP3 125 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 SLC16A13Q7RTY0 426 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 REC114Q7Z4M0 266 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 OR9G4Q8NGQ1 327 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 MED28Q9H204 178 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 ZC4H2Q9NQZ6 224 aa9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 LSM5Q9Y4Y9 91 aaKnown RBP9.09□□□□□ -0.95
PDLIM5-208ENST00000504489 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 PMS2P5A8MQ11 134 aa9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 NDUFA4O00483 81 aa9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 RND2P52198 227 aa9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 RELQ04864 619 aaPredicted RBP9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 ELOVL1Q9BW60 279 aa9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 SIGLEC8Q9NYZ4 499 aa9.08□□□□□ -0.96
PDLIM5-208ENST00000504489 PEMTQ9UBM1 199 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms